Macromolecule Annotations for the Entities in PDB 1IVH

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A242-392 d1ivha1 All alpha proteins Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain- like Medium chain acyl-CoA dehydrogenase-like, C- terminal domain Isovaleryl-CoA dehydrogenase, C-domain Human (Homo sapiens) [TaxId: 9606]
B242-392 d1ivhb1 All alpha proteins Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain- like Medium chain acyl-CoA dehydrogenase-like, C- terminal domain Isovaleryl-CoA dehydrogenase, C-domain Human (Homo sapiens) [TaxId: 9606]
C242-392 d1ivhc1 All alpha proteins Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain- like Medium chain acyl-CoA dehydrogenase-like, C- terminal domain Isovaleryl-CoA dehydrogenase, C-domain Human (Homo sapiens) [TaxId: 9606]
D242-392 d1ivhd1 All alpha proteins Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain- like Medium chain acyl-CoA dehydrogenase-like, C- terminal domain Isovaleryl-CoA dehydrogenase, C-domain Human (Homo sapiens) [TaxId: 9606]
A6-241 d1ivha2 Multi-domain proteins (alpha and beta) Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N- terminal and middle) domains Isovaleryl-coa dehydrogenase, NM domains Human (Homo sapiens) [TaxId: 9606]
B6-241 d1ivhb2 Multi-domain proteins (alpha and beta) Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N- terminal and middle) domains Isovaleryl-coa dehydrogenase, NM domains Human (Homo sapiens) [TaxId: 9606]
C6-241 d1ivhc2 Multi-domain proteins (alpha and beta) Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N- terminal and middle) domains Isovaleryl-coa dehydrogenase, NM domains Human (Homo sapiens) [TaxId: 9606]
D6-241 d1ivhd2 Multi-domain proteins (alpha and beta) Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N- terminal and middle) domains Isovaleryl-coa dehydrogenase, NM domains Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1ivhA01 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Butyryl-Coa Dehydrogenase, subunit A, domain 1
A2 1ivhA02 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2
A3 1ivhA03 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3
B1 1ivhB01 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Butyryl-Coa Dehydrogenase, subunit A, domain 1
B2 1ivhB02 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2
B3 1ivhB03 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3
C1 1ivhC01 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Butyryl-Coa Dehydrogenase, subunit A, domain 1
C2 1ivhC02 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2
C3 1ivhC03 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3
D1 1ivhD01 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Butyryl-Coa Dehydrogenase, subunit A, domain 1
D2 1ivhD02 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2
D3 1ivhD03 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain Domain Central domain of Acyl-CoA dehydrogenase has a beta-barrel fold. PFAM PF02770
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain Domain C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle. PFAM PF00441
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain Domain The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain. PFAM PF02771

Protein Modification Annotation

Type PDB Residue Nr. Description