Macromolecule Annotations for the Entities in PDB 1IR2

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
1 d1ir21_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
2 d1ir22_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
3 d1ir23_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
4 d1ir24_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
5 d1ir25_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
6 d1ir26_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
7 d1ir27_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
8 d1ir28_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
A150-475 d1ir2a1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
A8-149 d1ir2a2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
B150-475 d1ir2b1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
B9-149 d1ir2b2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
C150-475 d1ir2c1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
C10-149 d1ir2c2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
D150-475 d1ir2d1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
D9-149 d1ir2d2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
E150-475 d1ir2e1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
E11-149 d1ir2e2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
F150-475 d1ir2f1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
F11-149 d1ir2f2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
G150-475 d1ir2g1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
G10-149 d1ir2g2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
H150-475 d1ir2h1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
H8-149 d1ir2h2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
I d1ir2i_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
J d1ir2j_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
K d1ir2k_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
L d1ir2l_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
M d1ir2m_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
N d1ir2n_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
O d1ir2o_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
P d1ir2p_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
S150-475 d1ir2s1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
S11-149 d1ir2s2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
T150-475 d1ir2t1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
T10-149 d1ir2t2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
U150-475 d1ir2u1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
U7-149 d1ir2u2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
V150-475 d1ir2v1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
V7-149 d1ir2v2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
W150-475 d1ir2w1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
W10-149 d1ir2w2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
X150-475 d1ir2x1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
X10-149 d1ir2x2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
Y150-475 d1ir2y1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
Y11-149 d1ir2y2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
Z150-475 d1ir2z1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
Z10-149 d1ir2z2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
1 1ir2100 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
2 1ir2200 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
3 1ir2300 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
4 1ir2400 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
5 1ir2500 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
6 1ir2600 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
7 1ir2700 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
8 1ir2800 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
A1 1ir2A01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A2 1ir2A02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
B1 1ir2B01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
B2 1ir2B02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
C1 1ir2C01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C2 1ir2C02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
D1 1ir2D01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
D2 1ir2D02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
E1 1ir2E01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E2 1ir2E02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
F1 1ir2F01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
F2 1ir2F02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
G1 1ir2G01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G2 1ir2G02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
H1 1ir2H01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
H2 1ir2H02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
I 1ir2I00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
J 1ir2J00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
K 1ir2K00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
L 1ir2L00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
M 1ir2M00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
N 1ir2N00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
O 1ir2O00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
P 1ir2P00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
S1 1ir2S01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
S2 1ir2S02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
T1 1ir2T01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
T2 1ir2T02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
U1 1ir2U01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
U2 1ir2U02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
V1 1ir2V01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
V2 1ir2V02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
W1 1ir2W01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
W2 1ir2W02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
X1 1ir2X01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
X2 1ir2X02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
Y1 1ir2Y01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
Y2 1ir2Y02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
Z1 1ir2Z01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
Z2 1ir2Z02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F,G,H,S,T,U,V,W,X,Y,Z Large subunit of Rubisco (1IR2:A,B,C,D,E,F,G,H,S,T,U,V,W,X,Y,Z)
1,2,3,4,5,6,7,8,I,J,K,L,M,N,O,P Small subunit of Rubisco (1IR2:1,2,3,4,5,6,7,8,I,J,K,L,M,N,O,P)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description