Macromolecule Annotations for the Entities in PDB 1IM9

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A182-275 d1im9a1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Human (Homo sapiens) [TaxId: 9606]
A1-181 d1im9a2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Human (Homo sapiens), HLA-CW4 [TaxId: 9606]
B d1im9b_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Human (Homo sapiens) [TaxId: 9606]
D6-101 d1im9d1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin I set domains Killer cell inhibitory receptor Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]
D102-200 d1im9d2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin I set domains Killer cell inhibitory receptor Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]
E182-275 d1im9e1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Human (Homo sapiens) [TaxId: 9606]
E1-181 d1im9e2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Human (Homo sapiens), HLA-CW4 [TaxId: 9606]
F d1im9f_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
D PF00047 ig Immunoglobulin domain Domain Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain. PFAM PF00047
B PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
A PF00129 MHC_I Class I Histocompatibility antigen, domains alpha 1 and 2 Domain PFAM PF00129
A PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
D PF00047 ig Immunoglobulin domain Domain Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain. PFAM PF00047

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,E HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW- 4 CW*0401 ALPHA CHAIN (1IM9:A,E)
  • none
  • none
  • none
B,F Beta-2 microglobulin (1IM9:B,F)
C,G HLA-Cw4-specific peptide (1IM9:C,G)
  • none
  • none
  • none
D KILLER CELL IMMUNOGLOBULIN-LIKE RECEPTOR 2DL1 (1IM9:D)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description