1HVN

ZINC-AND SEQUENCE-DEPENDENT BINDING TO NUCLEIC ACIDS BY THE N-TERMINAL ZINC FINGER DOMAIN OF THE HIV-1 NUCLEOCAPSID PROTEIN: NMR STRUCTURE OF THE COMPLEX WITH THE PSI-SITE ANALOG, D/ACGCC


Macromolecule Annotations for the Entities in PDB 1HVN

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
E PF00098 zf-CCHC Zinc knuckle Domain The zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eukaryotic gene regulation, such as C. elegans GLH-1. Structure is an 18-residue zinc finger. PFAM PF00098

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
D DNA (5'-D(P*AP*CP*GP*CP*C)-3') (1HVN:D)
  • none
  • none
  • none
E Hiv-1 Nucleocapsid Zinc Finger (1HVN:E)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description