Macromolecule Annotations for the Entities in PDB 1HR0

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
R d1hr0r_ All alpha proteins DNA/RNA-binding 3-helical bundle Ribosomal protein S18 Ribosomal protein S18 Ribosomal protein S18 Thermus thermophilus [TaxId: 274]
M d1hr0m_ All alpha proteins S13-like H2TH domain S13-like H2TH domain Ribosomal protein S13 Ribosomal protein S13 Thermus thermophilus [TaxId: 274]
T d1hr0t_ All alpha proteins Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20 Ribosomal protein S20 Thermus thermophilus [TaxId: 274]
O d1hr0o_ All alpha proteins S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain Ribosomal protein S15 Ribosomal protein S15 Thermus thermophilus [TaxId: 274]
G d1hr0g_ All alpha proteins Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7 Thermus thermophilus [TaxId: 274]
W d1hr0w_ All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Translational initiation factor 1, IF1 Escherichia coli [TaxId: 562]
L d1hr0l_ All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Ribosomal protein S12 Thermus thermophilus [TaxId: 274]
Q d1hr0q_ All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Ribosomal protein S17 Thermus thermophilus [TaxId: 274]
B d1hr0b_ Alpha and beta proteins (a/b) Flavodoxin-like Ribosomal protein S2 Ribosomal protein S2 Ribosomal protein S2 Thermus thermophilus [TaxId: 274]
K d1hr0k_ Alpha and beta proteins (a/b) Ribonuclease H-like motif Translational machinery components Ribosomal protein L18 and S11 Ribosomal protein S11 Thermus thermophilus [TaxId: 274]
E74-154 d1hr0e1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Ribosomal protein S5, C-terminal domain Thermus thermophilus [TaxId: 274]
I d1hr0i_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Ribosomal protein S9 Thermus thermophilus [TaxId: 274]
P d1hr0p_ Alpha and beta proteins (a+b) Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16 Thermus thermophilus [TaxId: 274]
S d1hr0s_ Alpha and beta proteins (a+b) Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19 Thermus thermophilus [TaxId: 274]
E5-73 d1hr0e2 Alpha and beta proteins (a+b) dsRBD-like dsRNA-binding domain-like Ribosomal S5 protein, N-terminal domain Ribosomal S5 protein, N-terminal domain Thermus thermophilus [TaxId: 274]
C2-106 d1hr0c1 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 N-terminal domain Thermus thermophilus [TaxId: 274]
C107-207 d1hr0c2 Alpha and beta proteins (a+b) Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain Thermus thermophilus [TaxId: 274]
F d1hr0f_ Alpha and beta proteins (a+b) Ferredoxin-like Ribosomal protein S6 Ribosomal protein S6 Ribosomal protein S6 Thermus thermophilus [TaxId: 274]
J d1hr0j_ Alpha and beta proteins (a+b) Ferredoxin-like Ribosomal protein S10 Ribosomal protein S10 Ribosomal protein S10 Thermus thermophilus [TaxId: 274]
D d1hr0d_ Alpha and beta proteins (a+b) Alpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4 Ribosomal protein S4 Thermus thermophilus [TaxId: 274]
H d1hr0h_ Alpha and beta proteins (a+b) Ribosomal protein S8 Ribosomal protein S8 Ribosomal protein S8 Ribosomal protein S8 Thermus thermophilus [TaxId: 274]
N d1hr0n_ Small proteins Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) Ribosomal protein S14 Ribosomal protein S14 Thermus thermophilus [TaxId: 274]
V d1hr0v_ Peptides Arg-rich RNA binding peptides 30S ribosomal protein THX 30S ribosomal protein THX 30S ribosomal protein THX Thermus thermophilus [TaxId: 274]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
B2 1hr0B02 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
C1 1hr0C01 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3
C2 1hr0C02 Alpha Beta 2-Layer Sandwich Ribosomal protein S3 C-terminal domain
D1 1hr0D01 Mainly Alpha Orthogonal Bundle Ribosomal Protein S4 Delta 41; Chain A, domain 1 Ribosomal Protein S4 Delta 41; Chain A, domain 1
D2 1hr0D02 Alpha Beta Roll Structural Genomics Hypothetical 15.5 Kd Protein In mrcA- pckA Intergenic Region; Chain A Structural Genomics Hypothetical 15.5 Kd Protein In Mrca- pcka Intergenic Region; Chain
E1 1hr0E01 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain
E2 1hr0E02 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2
F 1hr0F00 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G 1hr0G00 Mainly Alpha Orthogonal Bundle Ribosomal Protein S7 Ribosomal Protein S7;
H1 1hr0H01 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8; Chain: A, domain 1
H2 1hr0H02 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1
I 1hr0I00 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2
J 1hr0J00 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
K 1hr0K00 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
L 1hr0L00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteins
M1 1hr0M01 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
M2 1hr0M02 Few Secondary Structures Irregular 30s ribosomal protein s13; domain 2 30s ribosomal protein s13, domain 2
N 1hr0N00 Few Secondary Structures Irregular 30s Ribosomal Protein S14; Chain N 30s Ribosomal Protein S14; Chain N
O 1hr0O00 Mainly Alpha Orthogonal Bundle Helix Hairpins
P 1hr0P00 Alpha Beta 2-Layer Sandwich S16 Ribosomal Protein; Chain: A;
Q 1hr0Q00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteins
R 1hr0R00 Few Secondary Structures Irregular 30s Ribosomal Protein S18 30s Ribosomal Protein S18
S 1hr0S00 Alpha Beta 2-Layer Sandwich 30s Ribosomal Protein S19; Chain A 30s Ribosomal Protein S19; Chain A
T 1hr0T00 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase; Chain G, domain 1
W 1hr0W00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteins

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A 16S RIBOSOMAL RNA (1HR0:A)
  • none
  • none
  • none
X FRAGMENT OF MESSENGER RNA (1HR0:X)
  • none
  • none
  • none
B 30S RIBOSOMAL PROTEIN S2 (1HR0:B)
C 30S RIBOSOMAL PROTEIN S3 (1HR0:C)
D 30S RIBOSOMAL PROTEIN S4 (1HR0:D)
E 30S RIBOSOMAL PROTEIN S5 (1HR0:E)
F 30S RIBOSOMAL PROTEIN S6 (1HR0:F)
G 30S RIBOSOMAL PROTEIN S7 (1HR0:G)
H 30S RIBOSOMAL PROTEIN S8 (1HR0:H)
I 30S RIBOSOMAL PROTEIN S9 (1HR0:I)
J 30S RIBOSOMAL PROTEIN S10 (1HR0:J)
K 30S RIBOSOMAL PROTEIN S11 (1HR0:K)
L 30S RIBOSOMAL PROTEIN S12 (1HR0:L)
M 30S RIBOSOMAL PROTEIN S13 (1HR0:M)
N 30S RIBOSOMAL PROTEIN S14 (1HR0:N)
O 30S RIBOSOMAL PROTEIN S15 (1HR0:O)
P 30S RIBOSOMAL PROTEIN S16 (1HR0:P)
Q 30S RIBOSOMAL PROTEIN S17 (1HR0:Q)
R 30S RIBOSOMAL PROTEIN S18 (1HR0:R)
S 30S RIBOSOMAL PROTEIN S19 (1HR0:S)
T 30S RIBOSOMAL PROTEIN S20 (1HR0:T)
V 30S RIBOSOMAL PROTEIN THX (1HR0:V)
  • none
W TRANSLATION INITIATION FACTOR (1HR0:W)

Protein Modification Annotation

Type PDB Residue Nr. Description