Macromolecule Annotations for the Entities in PDB 1HMV

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A430-554 d1hmva1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H HIV RNase H (Domain of reverse transcriptase) Human immunodeficiency virus type 1 [TaxId: 11676]
A1-429 d1hmva2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
B d1hmvb_ Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
C430-554 d1hmvc1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H HIV RNase H (Domain of reverse transcriptase) Human immunodeficiency virus type 1 [TaxId: 11676]
C1-429 d1hmvc2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
D d1hmvd_ Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
E430-554 d1hmve1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H HIV RNase H (Domain of reverse transcriptase) Human immunodeficiency virus type 1 [TaxId: 11676]
E1-429 d1hmve2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
F d1hmvf_ Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
G430-554 d1hmvg1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H HIV RNase H (Domain of reverse transcriptase) Human immunodeficiency virus type 1 [TaxId: 11676]
G1-429 d1hmvg2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]
H d1hmvh_ Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases Reverse transcriptase HIV-1 reverse transcriptase Human immunodeficiency virus type 1 [TaxId: 11676]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1hmvA01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
A2 1hmvA02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A3 1hmvA03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A4 1hmvA04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A5 1hmvA05 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
B1 1hmvB01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
B2 1hmvB02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
B3 1hmvB03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
B4 1hmvB04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C1 1hmvC01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
C2 1hmvC02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C3 1hmvC03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C4 1hmvC04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C5 1hmvC05 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
D1 1hmvD01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
D2 1hmvD02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
D3 1hmvD03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
D4 1hmvD04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E1 1hmvE01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
E2 1hmvE02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E3 1hmvE03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E4 1hmvE04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E5 1hmvE05 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
F1 1hmvF01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
F2 1hmvF02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
F3 1hmvF03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
F4 1hmvF04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G1 1hmvG01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
G2 1hmvG02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G3 1hmvG03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G4 1hmvG04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G5 1hmvG05 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
H1 1hmvH01 Alpha Beta Roll HIV Type 1 Reverse Transcriptase; Chain A, domain 1 HIV Type 1 Reverse Transcriptase, subunit A, domain 1
H2 1hmvH02 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
H3 1hmvH03 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
H4 1hmvH04 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C,E,G HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) (1HMV:A,C,E,G)
  • none
B,D,F,H HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51) (1HMV:B,D,F,H)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description