Macromolecule Annotations for the Entities in PDB 1HLV

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF04218 CENP-B_N CENP-B N-terminal DNA-binding domain Domain Centromere Protein B (CENP-B) is a DNA-binding protein localised to the centromere. Within the N-terminal 125 residues, there is a DNA-binding region, which binds to a corresponding 17bp CENP-B box sequence. CENP-B dimers either bind two separate DNA molecules or alternatively, they may bind two CENP-B boxes on one DNA molecule, with the intervening stretch of DNA forming a loop structure. The CENP-B DNA-binding domain consists of two repeating domains, RP1 and RP2. This family corresponds to RP1 has been shown to consist of four helices in a helix-turn-helix structure [1]. PFAM PF04218
A PF03221 HTH_Tnp_Tc5 Tc5 transposase DNA-binding domain Domain PFAM PF03221

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
B CENP-B BOX DNA (1HLV:B)
  • none
  • none
  • none
C CENP-B BOX DNA (1HLV:C)
  • none
  • none
  • none
A MAJOR CENTROMERE AUTOANTIGEN B (1HLV:A)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description