Warning
You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.
MyPDB
Toggle navigation
RCSB PDB
Deposit
Prepare Data
pdb_extract
SF-Tool
Ligand Expo
MAXIT
Validate Data
Validation Server
Information for Journals
Validation Task Forces
Deposit Data
wwPDB OneDep System
Deposition Help & Resources
Deposit FAQ
Tutorials
Annotation Policies
Processing Procedures
PDBx/mmCIF Dictionary
Chemical Component Dictionary
PDB Format Guide
BioSync Beamlines/Facilities
Related Tools
Search
Advanced Search
Drilldown Search
Unreleased & New Entries
Sequences
Ligands
Drugs & Drug Targets
Browse by Annotation
PDB Statistics
Visualize
Visualize3DViewer
PoseView
Protein Feature View
Human Gene View
Pathway View
Analyze
Sequence & Structure Alignment
Protein Symmetry
Structure Quality
Map Genomic Position to Protein
PDB Statistics
Third Party Tools
Download
Coordinates & Experimental Data
Sequences
Ligands
FTP Archive & Services
HTTPS Services
Other Services
RESTful Web Services
Learn
About
Molecule of the Month
Browse all Resources
Educational Resources
Curricula
Guide to PDB Data
News and Events
More
Contact Us
Citing Us
Usage & Privacy
Help Topics
About RCSB PDB
Team Members
Advisory Committee
News
Publications
Careers
139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
Go
Advanced
Search
|
Browse
by Annotations
|
Search
History
|
Previous
Results
Navigation Tabs
Structure Summary
3D View
Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1HHJ
THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
Download Files
FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Biological Assembly 1 (gz) (A+S)
Biological Assembly 2 (gz) (A+S)
Macromolecule Annotations for the Entities in PDB 1HHJ
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A182-275
d1hhja1
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
Class I MHC, alpha-3 domain
Human (Homo sapiens) [TaxId: 9606]
B
d1hhjb_
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
beta2-microglobulin
Human (Homo sapiens) [TaxId: 9606]
D182-275
d1hhjd1
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
Class I MHC, alpha-3 domain
Human (Homo sapiens) [TaxId: 9606]
E
d1hhje_
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
beta2-microglobulin
Human (Homo sapiens) [TaxId: 9606]
A1-181
d1hhja2
Alpha and beta proteins (a+b)
MHC antigen-recognition domain
MHC antigen-recognition domain
MHC antigen-recognition domain
Class I MHC, alpha-1 and alpha-2 domains
Human (Homo sapiens), HLA-A2.1 [TaxId: 9606]
D1-181
d1hhjd2
Alpha and beta proteins (a+b)
MHC antigen-recognition domain
MHC antigen-recognition domain
MHC antigen-recognition domain
Class I MHC, alpha-1 and alpha-2 domains
Human (Homo sapiens), HLA-A2.1 [TaxId: 9606]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1hhjA01
Alpha Beta
2-Layer Sandwich
Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1
Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
A2
1hhjA02
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
B
1hhjB00
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
D1
1hhjD01
Alpha Beta
2-Layer Sandwich
Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1
Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
D2
1hhjD02
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
E
1hhjE00
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) (1HHJ:A,D)
none
none
none
B,E
BETA 2-MICROGLOBULIN (1HHJ:B,E)
Protein Binding
Identical Protein Binding
Retina Homeostasis
Positive Regulation of T Cell Mediated Cytotoxicity
Response to Molecule of Bacterial Origin
Immune System Process
Antigen Processing and Presentation of Peptide Antigen Via Mhc Class I
Antigen Processing and Presentation of Exogenous Peptide Antigen Via Mhc Class I Tap Dependent
Antigen Processing and Presentation of Exogenous Peptide Antigen Via Mhc Class I Tap Independent
Antigen Processing and Presentation of Exogenous Protein Antigen Via Mhc Class Ib Tap Dependent
Positive Regulation of T Cell Cytokine Production
Iron Ion Transport
Immune Response
Negative Regulation of Neuron Projection Development
Antigen Processing and Presentation of Endogenous Peptide Antigen Via Mhc Class I
Positive Regulation of Protein Binding
T Cell Differentiation in Thymus
Ferric Iron Import
Protein Refolding
Response to Drug
Neutrophil Degranulation
Cellular Protein Metabolic Process
Innate Immune Response
Regulation of Erythrocyte Differentiation
Response to Cadmium Ion
Positive Regulation of Receptor Mediated Endocytosis
Regulation of Defense Response to Virus by Virus
Regulation of Immune Response
Iron Ion Homeostasis
Interferon Gamma Mediated Signaling Pathway
Cellular Response to Iron Ion
Cellular Response to Iron(iii) Ion
Negative Regulation of Receptor Binding
Positive Regulation of Receptor Binding
Regulation of Iron Ion Import
Positive Regulation of Ferrous Iron Binding
Positive Regulation of Transferrin Receptor Binding
Golgi Membrane
Extracellular Region
Extracellular Space
Endoplasmic Reticulum Lumen
Golgi Apparatus
Cytosol
Plasma Membrane
Focal Adhesion
External Side of Plasma Membrane
Cell Surface
Er to Golgi Transport Vesicle Membrane
Membrane
Phagocytic Vesicle Membrane
Early Endosome Membrane
Early Endosome Lumen
Specific Granule Lumen
Mhc Class I Protein Complex
Recycling Endosome Membrane
Extracellular Exosome
Tertiary Granule Lumen
Hfe Transferrin Receptor Complex
C,F
HIV-1 REVERSE TRANSCRIPTASE (RESIDUES 309- 317) (1HHJ:C,F)
none
none
none
Protein Modification Annotation
Type
PDB Residue Nr.
Description