Macromolecule Annotations for the Entities in PDB 1HC7

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A277-403 d1hc7a1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
A5-276 d1hc7a2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
A404-477 d1hc7a3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
B277-403 d1hc7b1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
B5-276 d1hc7b2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
B404-477 d1hc7b3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
C277-403 d1hc7c1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
C5-276 d1hc7c2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
C404-477 d1hc7c3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
D277-403 d1hc7d1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
D5-276 d1hc7d2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
D404-477 d1hc7d3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF03129 HGTP_anticodon Anticodon binding domain Domain This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [1] it is probably the anticodon binding domain [2]. PFAM PF03129
A PF09180 ProRS-C_1 Prolyl-tRNA synthetase, C-terminal Domain Members of this family are predominantly found in prokaryotic prolyl-tRNA synthetase. They contain a zinc binding site, and adopt a structure consisting of alpha helices and antiparallel beta sheets arranged in 2 layers, in a beta-alpha-beta-alpha-beta motif [1]. PFAM PF09180
A PF00587 tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T) Domain Other tRNA synthetase sub-families are too dissimilar to be included. This domain is the core catalytic domain of tRNA synthetases and includes glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. PFAM PF00587

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation

Type PDB Residue Nr. Description