Macromolecule Annotations for the Entities in PDB 1HC7

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A277-403 d1hc7a1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
A5-276 d1hc7a2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
A404-477 d1hc7a3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
B277-403 d1hc7b1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
B5-276 d1hc7b2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
B404-477 d1hc7b3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
C277-403 d1hc7c1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
C5-276 d1hc7c2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
C404-477 d1hc7c3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]
D277-403 d1hc7d1 Alpha and beta proteins (a/b) Anticodon-binding domain-like Class II aaRS ABD-related Anticodon-binding domain of Class II aaRS Prolyl-tRNA synthetase (ProRS) domain Thermus thermophilus [TaxId: 274]
D5-276 d1hc7d2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)- like, catalytic domain Prolyl-tRNA synthetase (ProRS) Thermus thermophilus [TaxId: 274]
D404-477 d1hc7d3 Alpha and beta proteins (a+b) IF3-like C-terminal domain of ProRS C-terminal domain of ProRS C-terminal domain of ProRS Thermus thermophilus [TaxId: 274]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00587 tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T) Domain Other tRNA synthetase sub-families are too dissimilar to be included. This domain is the core catalytic domain of tRNA synthetases and includes glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. PFAM PF00587
A PF09180 ProRS-C_1 Prolyl-tRNA synthetase, C-terminal Domain Members of this family are predominantly found in prokaryotic prolyl-tRNA synthetase. They contain a zinc binding site, and adopt a structure consisting of alpha helices and antiparallel beta sheets arranged in 2 layers, in a beta-alpha-beta-alpha-beta motif [1]. PFAM PF09180
A PF03129 HGTP_anticodon Anticodon binding domain Domain This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [1] it is probably the anticodon binding domain [2]. PFAM PF03129

Protein Modification Annotation

Type PDB Residue Nr. Description