Macromolecule Annotations for the Entities in PDB 1H8E

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A380-510 d1h8ea1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
A19-94 d1h8ea2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
A95-379 d1h8ea3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
B380-510 d1h8eb1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
B24-94 d1h8eb2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
B95-379 d1h8eb3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
C380-510 d1h8ec1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
C19-94 d1h8ec2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
C95-379 d1h8ec3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
D358-475 d1h8ed1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
D9-81 d1h8ed2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
D82-357 d1h8ed3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
E358-464 d1h8ee1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
E9-81 d1h8ee2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
E82-357 d1h8ee3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
F358-474 d1h8ef1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
F9-81 d1h8ef2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
F82-357 d1h8ef3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
G d1h8eg_ Alpha and beta proteins (a/b) Pyruvate kinase C-terminal domain-like ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit Cow (Bos taurus) [TaxId: 9913]
H d1h8eh_ All beta proteins Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Cow (Bos taurus) [TaxId: 9913]
I d1h8ei_ All alpha proteins Non-globular all-alpha subunits of globular proteins Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Cow (Bos taurus) [TaxId: 9913]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1h8eA01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
A2 1h8eA02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
A3 1h8eA03 Mainly Alpha Up-down Bundle Lysin
B1 1h8eB01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
B2 1h8eB02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
B3 1h8eB03 Mainly Alpha Up-down Bundle Lysin
C1 1h8eC01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
C2 1h8eC02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
C3 1h8eC03 Mainly Alpha Up-down Bundle Lysin
D1 1h8eD01 Mainly Beta Beta Barrel Thrombin, subunit H
D2 1h8eD02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
D3 1h8eD03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
E1 1h8eE01 Mainly Beta Beta Barrel Thrombin, subunit H
E2 1h8eE02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
E3 1h8eE03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
F1 1h8eF01 Mainly Beta Beta Barrel Thrombin, subunit H
F2 1h8eF02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
F3 1h8eF03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
G1 1h8eG01 Mainly Alpha Orthogonal Bundle Helix Hairpins
G2 1h8eG02 Alpha Beta 3-Layer(aba) Sandwich Pyruvate Kinase; Chain: A, domain 1
H 1h8eH00 Mainly Beta Sandwich ATP Synthase; domain 1 ATP Synthase; domain 1
I 1h8eI00 Mainly Alpha Orthogonal Bundle Atp Synthase Epsilon Chain; Chain: I;

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
G PF00231 ATP-synt ATP synthase Domain PFAM PF00231
D PF02874 ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain Domain This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. PFAM PF02874
D PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family
H PF02823 ATP-synt_DE_N ATP synthase, Delta/Epsilon chain, beta-sandwich domain Domain Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213). PFAM PF02823
D PF00306 ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain Domain PFAM PF00306
A PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family
A PF00306 ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain Domain PFAM PF00306
A PF02874 ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain Domain This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. PFAM PF02874
I PF04627 ATP-synt_Eps Mitochondrial ATP synthase epsilon chain Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C BOVINE MITOCHONDRIAL F1-ATPASE (1H8E:A,B,C)
D,E,F BOVINE MITOCHONDRIAL F1-ATPASE (1H8E:D,E,F)
G BOVINE MITOCHONDRIAL F1-ATPASE (1H8E:G)
H BOVINE MITOCHONDRIAL F1-ATPASE (1H8E:H)
I BOVINE MITOCHONDRIAL F1-ATPASE (1H8E:I)

Protein Modification Annotation

Type PDB Residue Nr. Description