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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1GYQ
CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE FROM LEISHMANIA MEXICANA IN COMPLEX WITH N6-BENZYL-NAD
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FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Biological Assembly (gz) (A+S)
Macromolecule Annotations for the Entities in PDB 1GYQ
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A1-165,A335-358
d1gyqa1
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
Glyceraldehyde-3-phosphate dehydrogenase- like, N-terminal domain
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
B1-165,B335-358
d1gyqb1
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
Glyceraldehyde-3-phosphate dehydrogenase- like, N-terminal domain
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
C1-165,C335-358
d1gyqc1
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
Glyceraldehyde-3-phosphate dehydrogenase- like, N-terminal domain
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
D1-165,D335-358
d1gyqd1
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
Glyceraldehyde-3-phosphate dehydrogenase- like, N-terminal domain
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
A166-334
d1gyqa2
Alpha and beta proteins (a+b)
FwdE/GAPDH domain-like
Glyceraldehyde-3-phosphate dehydrogenase- like, C-terminal domain
GAPDH-like
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
B166-334
d1gyqb2
Alpha and beta proteins (a+b)
FwdE/GAPDH domain-like
Glyceraldehyde-3-phosphate dehydrogenase- like, C-terminal domain
GAPDH-like
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
C166-334
d1gyqc2
Alpha and beta proteins (a+b)
FwdE/GAPDH domain-like
Glyceraldehyde-3-phosphate dehydrogenase- like, C-terminal domain
GAPDH-like
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
D166-334
d1gyqd2
Alpha and beta proteins (a+b)
FwdE/GAPDH domain-like
Glyceraldehyde-3-phosphate dehydrogenase- like, C-terminal domain
GAPDH-like
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Leishmania mexicana [TaxId: 5665]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1gyqA01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
NAD(P)-binding Rossmann-like Domain
A2
1gyqA02
Alpha Beta
2-Layer Sandwich
Dihydrodipicolinate Reductase; domain 2
Dihydrodipicolinate Reductase; domain 2
B1
1gyqB01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
NAD(P)-binding Rossmann-like Domain
B2
1gyqB02
Alpha Beta
2-Layer Sandwich
Dihydrodipicolinate Reductase; domain 2
Dihydrodipicolinate Reductase; domain 2
C1
1gyqC01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
NAD(P)-binding Rossmann-like Domain
C2
1gyqC02
Alpha Beta
2-Layer Sandwich
Dihydrodipicolinate Reductase; domain 2
Dihydrodipicolinate Reductase; domain 2
D1
1gyqD01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
NAD(P)-binding Rossmann-like Domain
D2
1gyqD02
Alpha Beta
2-Layer Sandwich
Dihydrodipicolinate Reductase; domain 2
Dihydrodipicolinate Reductase; domain 2
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,B,C,D
PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE) (1GYQ:A,B,C,D)
Glyceraldehyde 3 Phosphate Dehydrogenase (nad+) (phosphorylating) Activity
Oxidoreductase Activity
Oxidoreductase Activity Acting On the Aldehyde or Oxo Group of Donors NAD or Nadp As Acceptor
Nadp Binding
NAD Binding
Glucose Metabolic Process
Glycolytic Process
Oxidation Reduction Process
Peroxisome
Glycosome
Protein Modification Annotation
Type
PDB Residue Nr.
Description