Macromolecule Annotations for the Entities in PDB 1GPM

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A3-207 d1gpma2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) GMP synthetase Escherichia coli [TaxId: 562]
B3-207 d1gpmb2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) GMP synthetase Escherichia coli [TaxId: 562]
C3-207 d1gpmc2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) GMP synthetase Escherichia coli [TaxId: 562]
D3-207 d1gpmd2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) GMP synthetase Escherichia coli [TaxId: 562]
A208-404 d1gpma1 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Adenine nucleotide alpha hydrolases-like N-type ATP pyrophosphatases GMP synthetase, central domain Escherichia coli [TaxId: 562]
B208-404 d1gpmb1 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Adenine nucleotide alpha hydrolases-like N-type ATP pyrophosphatases GMP synthetase, central domain Escherichia coli [TaxId: 562]
C208-404 d1gpmc1 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Adenine nucleotide alpha hydrolases-like N-type ATP pyrophosphatases GMP synthetase, central domain Escherichia coli [TaxId: 562]
D208-404 d1gpmd1 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Adenine nucleotide alpha hydrolases-like N-type ATP pyrophosphatases GMP synthetase, central domain Escherichia coli [TaxId: 562]
A405-525 d1gpma3 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain Escherichia coli [TaxId: 562]
B405-525 d1gpmb3 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain Escherichia coli [TaxId: 562]
C405-525 d1gpmc3 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain Escherichia coli [TaxId: 562]
D405-525 d1gpmd3 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00958 GMP_synt_C GMP synthase C terminal domain Domain GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. This family is the C-terminal domain specific to the GMP synthases Swiss:P49915 EC:6.3.5.2. In prokaryotes this domain mediates dimerisation. Eukaryotic GMP synthases are monomers. This domain in eukaryotes includes several large insertions that may form globular domains. PFAM PF00958
A PF00117 GATase Glutamine amidotransferase class-I Domain PFAM PF00117
A PF02540 NAD_synthase NAD synthase Domain NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation. PFAM PF02540

Protein Modification Annotation

Type PDB Residue Nr. Description