Macromolecule Annotations for the Entities in PDB 1GK8

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A150-475 d1gk8a1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
A7-149 d1gk8a2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
C150-475 d1gk8c1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
C7-149 d1gk8c2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
E150-475 d1gk8e1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
E11-149 d1gk8e2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
G150-475 d1gk8g1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
G9-149 d1gk8g2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
I d1gk8i_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
K d1gk8k_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
M d1gk8m_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]
O d1gk8o_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Chlamydomonas reinhardtii [TaxId: 3055]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF02788 RuBisCO_large_N Ribulose bisphosphate carboxylase large chain, N-terminal domain Domain The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. PFAM PF02788
I PF00101 RuBisCO_small Ribulose bisphosphate carboxylase, small chain Domain PFAM PF00101
A PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain Domain The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. PFAM PF00016

Protein Modification Annotation

Type PDB Residue Nr. Description