Macromolecule Annotations for the Entities in PDB 1GAX

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A190-342 d1gaxa2 All beta proteins ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B190-342 d1gaxb2 All beta proteins ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
A1-189,A343-578 d1gaxa3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B1-189,B343-578 d1gaxb3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
A797-862 d1gaxa4 All alpha proteins Long alpha-hairpin tRNA-binding arm Valyl-tRNA synthetase (ValRS) C-terminal domain Valyl-tRNA synthetase (ValRS) C-terminal domain Thermus thermophilus [TaxId: 274]
A579-796 d1gaxa5 All alpha proteins Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B797-862 d1gaxb4 All alpha proteins Long alpha-hairpin tRNA-binding arm Valyl-tRNA synthetase (ValRS) C-terminal domain Valyl-tRNA synthetase (ValRS) C-terminal domain Thermus thermophilus [TaxId: 274]
B579-796 d1gaxb5 All alpha proteins Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF10458 Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding arm Domain This domain is found at the C-terminus of Valyl tRNA synthetases. PFAM PF10458
A PF00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V) Family
A PF08264 Anticodon_1 Anticodon-binding domain of tRNA Domain This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA. PFAM PF08264

Protein Modification Annotation

Type PDB Residue Nr. Description