Macromolecule Annotations for the Entities in PDB 1G6R

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-117 d1g6ra1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
C1-117 d1g6rc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
B1-117 d1g6rb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
D1-117 d1g6rd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
H182-274 d1g6rh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Mouse (Mus musculus) [TaxId: 10090]
L d1g6rl_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Mouse (Mus musculus) [TaxId: 10090]
I182-274 d1g6ri1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Mouse (Mus musculus) [TaxId: 10090]
M d1g6rm_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Mouse (Mus musculus) [TaxId: 10090]
A118-213 d1g6ra2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
C118-213 d1g6rc2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
B118-247 d1g6rb2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
D118-247 d1g6rd2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
H1-181 d1g6rh2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Mouse (Mus musculus), H-2KB [TaxId: 10090]
I1-181 d1g6ri2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Mouse (Mus musculus), H-2KB [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF09291 DUF1968 Domain of unknown function (DUF1968) Domain Members of this family are found in mammalian T-cell antigen receptor, and adopt an immunoglobulin-like beta-sandwich fold, with seven strands in two beta-sheets in a Greek-key topology. Their exact function has not, as yet, been determined. PFAM PF09291
H PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
H PF00129 MHC_I Class I Histocompatibility antigen, domains alpha 1 and 2 Domain PFAM PF00129
B PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
L PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
B PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
A PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C ALPHA T CELL RECEPTOR (1G6R:A,C)
  • none
  • none
  • none
B,D BETA T CELL RECEPTOR (1G6R:B,D)
  • none
  • none
  • none
H,I MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I MOLECULE (1G6R:H,I)
  • none
  • none
  • none
L,M BETA-2 MICROGLOBULIN (1G6R:L,M)
P,Q SIYR PEPTIDE (1G6R:P,Q)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description