Macromolecule Annotations for the Entities in PDB 1FOE

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1034-1239 d1foea1 All alpha proteins DBL homology domain (DH-domain) DBL homology domain (DH-domain) DBL homology domain (DH-domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
C1036-1239 d1foec1 All alpha proteins DBL homology domain (DH-domain) DBL homology domain (DH-domain) DBL homology domain (DH-domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
E1035-1239 d1foee1 All alpha proteins DBL homology domain (DH-domain) DBL homology domain (DH-domain) DBL homology domain (DH-domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
G1035-1239 d1foeg1 All alpha proteins DBL homology domain (DH-domain) DBL homology domain (DH-domain) DBL homology domain (DH-domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
A1240-1401 d1foea2 All beta proteins PH domain-like barrel PH domain-like Pleckstrin-homology domain (PH domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
C1240-1401 d1foec2 All beta proteins PH domain-like barrel PH domain-like Pleckstrin-homology domain (PH domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
E1240-1401 d1foee2 All beta proteins PH domain-like barrel PH domain-like Pleckstrin-homology domain (PH domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
G1240-1401 d1foeg2 All beta proteins PH domain-like barrel PH domain-like Pleckstrin-homology domain (PH domain) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) Mouse (Mus musculus) [TaxId: 10090]
B d1foeb_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rac Human (Homo sapiens) [TaxId: 9606]
D d1foed_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rac Human (Homo sapiens) [TaxId: 9606]
F d1foef_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rac Human (Homo sapiens) [TaxId: 9606]
H d1foeh_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rac Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00169 PH PH domain Domain PH stands for pleckstrin homology. PFAM PF00169
B PF00071 Ras Ras family Domain Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1]. PFAM PF00071
A PF00621 RhoGEF RhoGEF domain Domain Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Also called Dbl-homologous (DH) domain. It appears that Pfam:PF00169 domains invariably occur C-terminal to RhoGEF/DH domains. PFAM PF00621

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C,E,G T-LYMPHOMA INVASION AND METASTASIS INDUCING PROTEIN 1 (1FOE:A,C,E,G)
  • none
B,D,F,H RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE (1FOE:B,D,F,H)

Protein Modification Annotation

Type PDB Residue Nr. Description