Macromolecule Annotations for the Entities in PDB 1F5T

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1002-1064 d1f5ta1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
B2002-2064 d1f5tb1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
C3002-3064 d1f5tc1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
D4002-4064 d1f5td1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
A1065-1121 d1f5ta2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
B2065-2121 d1f5tb2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
C3065-3121 d1f5tc2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
D4065-4121 d1f5td2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain Domain This family includes the Diphtheria toxin repressor. DNA binding is through a helix-turn-helix motif. PFAM PF01325
A PF02742 Fe_dep_repr_C Iron dependent repressor, metal binding and dimerisation domain Domain This family includes the Diphtheria toxin repressor. PFAM PF02742

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
E 43MER DNA CONTAINING DXTR CONSENSUS BINDING SEQUENCE (1F5T:E)
  • none
  • none
  • none
F 43MER DNA CONTAINING DXTR CONSENSUS BINDING SEQUENCE (1F5T:F)
  • none
  • none
  • none
A,B,C,D DIPHTHERIA TOXIN REPRESSOR (1F5T:A,B,C,D)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description