Macromolecule Annotations for the Entities in PDB 1F3J

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A83-181 d1f3ja1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
B94-191 d1f3jb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
D83-181 d1f3jd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
E94-191 d1f3je1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
A1-82 d1f3ja2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
B4-93 d1f3jb2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
D1-82 d1f3jd2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
E4-93 d1f3je2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-A(G7) [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
A PF00993 MHC_II_alpha Class II histocompatibility antigen, alpha domain Domain PFAM PF00993
B PF00969 MHC_II_beta Class II histocompatibility antigen, beta domain Domain PFAM PF00969
A PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,D H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN (1F3J:A,D)
  • none
B,E MHC CLASS II NOD (1F3J:B,E)
  • none
P,Q LYSOZYME C (1F3J:P,Q)
  • none
  • none
  • none