Macromolecule Annotations for the Entities in PDB 1EG0

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1eg0a_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
B d1eg0b_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
C d1eg0c_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
D d1eg0d_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
E d1eg0e_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
F d1eg0f_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
G d1eg0g_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
H d1eg0h_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
J d1eg0j_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
K d1eg0k_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
N d1eg0n_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF00333 Ribosomal_S5 Ribosomal protein S5, N-terminal domain Domain PFAM PF00333
B PF03719 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain Domain PFAM PF03719
C PF01250 Ribosomal_S6 Ribosomal protein S6 Domain PFAM PF01250
A PF01479 S4 S4 domain Domain The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA. PFAM PF01479
A PF00163 Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain Family
E PF00410 Ribosomal_S8 Ribosomal protein S8 Domain PFAM PF00410
D PF00177 Ribosomal_S7 Ribosomal protein S7p/S5e Domain This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. PFAM PF00177

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
I FRAGMENT OF 16S RRNA HELIX 23 (1EG0:I)
  • none
  • none
  • none
L FRAGMENT OF 23S RRNA (1EG0:L)
  • none
  • none
  • none
M HELIX 95 OF 23S RRNA (1EG0:M)
  • none
  • none
  • none
O FORMYL-METHIONYL-TRNA (1EG0:O)
  • none
  • none
  • none
A PROTEIN (S4 RIBOSOMAL PROTEIN) (1EG0:A)
B PROTEIN (S5 RIBOSOMAL PROTEIN) (1EG0:B)
C PROTEIN (S6 RIBOSOMAL PROTEIN) (1EG0:C)
D PROTEIN (S7 RIBOSOMAL PROTEIN) (1EG0:D)
E PROTEIN (S8 RIBOSOMAL PROTEIN) (1EG0:E)
F PROTEIN (S15 RIBOSOMAL PROTEIN) (1EG0:F)
G PROTEIN (S17 RIBOSOMAL PROTEIN) (1EG0:G)
H PROTEIN (S20 RIBOSOMAL PROTEIN) (1EG0:H)
  • none
  • none
  • none
N PROTEIN (RIBOSOMAL PROTEIN L1) (1EG0:N)
J PROTEIN (RIBOSOMAL PROTEIN L6) (1EG0:J)
K PROTEIN (RIBOSOMAL PROTEIN L11) (1EG0:K)