Macromolecule Annotations for the Entities in PDB 1EG0

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1eg0a_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
B d1eg0b_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
C d1eg0c_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
D d1eg0d_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
E d1eg0e_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
F d1eg0f_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
G d1eg0g_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
H d1eg0h_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
J d1eg0j_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
K d1eg0k_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]
N d1eg0n_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Ribosome complexes 70S ribosome functional complex Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01479 S4 S4 domain Domain The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA. PFAM PF01479
B PF03719 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain Domain PFAM PF03719
E PF00410 Ribosomal_S8 Ribosomal protein S8 Domain PFAM PF00410
D PF00177 Ribosomal_S7 Ribosomal protein S7p/S5e Domain This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. PFAM PF00177
B PF00333 Ribosomal_S5 Ribosomal protein S5, N-terminal domain Domain PFAM PF00333
C PF01250 Ribosomal_S6 Ribosomal protein S6 Domain PFAM PF01250
A PF00163 Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
I FRAGMENT OF 16S RRNA HELIX 23 (1EG0:I)
  • none
  • none
  • none
L FRAGMENT OF 23S RRNA (1EG0:L)
  • none
  • none
  • none
M HELIX 95 OF 23S RRNA (1EG0:M)
  • none
  • none
  • none
O FORMYL-METHIONYL-TRNA (1EG0:O)
  • none
  • none
  • none
A PROTEIN (S4 RIBOSOMAL PROTEIN) (1EG0:A)
B PROTEIN (S5 RIBOSOMAL PROTEIN) (1EG0:B)
C PROTEIN (S6 RIBOSOMAL PROTEIN) (1EG0:C)
D PROTEIN (S7 RIBOSOMAL PROTEIN) (1EG0:D)
E PROTEIN (S8 RIBOSOMAL PROTEIN) (1EG0:E)
F PROTEIN (S15 RIBOSOMAL PROTEIN) (1EG0:F)
G PROTEIN (S17 RIBOSOMAL PROTEIN) (1EG0:G)
H PROTEIN (S20 RIBOSOMAL PROTEIN) (1EG0:H)
  • none
  • none
  • none
N PROTEIN (RIBOSOMAL PROTEIN L1) (1EG0:N)
J PROTEIN (RIBOSOMAL PROTEIN L6) (1EG0:J)
K PROTEIN (RIBOSOMAL PROTEIN L11) (1EG0:K)

Protein Modification Annotation

Type PDB Residue Nr. Description