Macromolecule Annotations for the Entities in PDB 1EAK

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A32-107 d1eaka1 All alpha proteins PGBD-like PGBD-like MMP N-terminal domain Gelatinase A (MMP-2) Human (Homo sapiens) [TaxId: 9606]
A108-216,A394-452 d1eaka2 Alpha and beta proteins (a+b) Zincin-like Metalloproteases ("zincins"), catalytic domain Matrix metalloproteases, catalytic domain Gelatinase A Human (Homo sapiens) [TaxId: 9606]
A217-277 d1eaka3 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
A278-335 d1eaka4 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
A336-393 d1eaka5 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
B32-107 d1eakb1 All alpha proteins PGBD-like PGBD-like MMP N-terminal domain Gelatinase A (MMP-2) Human (Homo sapiens) [TaxId: 9606]
B108-216,B394-450 d1eakb2 Alpha and beta proteins (a+b) Zincin-like Metalloproteases ("zincins"), catalytic domain Matrix metalloproteases, catalytic domain Gelatinase A Human (Homo sapiens) [TaxId: 9606]
B217-277 d1eakb3 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
B278-335 d1eakb4 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
B336-393 d1eakb5 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
C32-107 d1eakc1 All alpha proteins PGBD-like PGBD-like MMP N-terminal domain Gelatinase A (MMP-2) Human (Homo sapiens) [TaxId: 9606]
C108-216,C394-449 d1eakc2 Alpha and beta proteins (a+b) Zincin-like Metalloproteases ("zincins"), catalytic domain Matrix metalloproteases, catalytic domain Gelatinase A Human (Homo sapiens) [TaxId: 9606]
C217-277 d1eakc3 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
C278-335 d1eakc4 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
C336-393 d1eakc5 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
D32-107 d1eakd1 All alpha proteins PGBD-like PGBD-like MMP N-terminal domain Gelatinase A (MMP-2) Human (Homo sapiens) [TaxId: 9606]
D108-216,D394-450 d1eakd2 Alpha and beta proteins (a+b) Zincin-like Metalloproteases ("zincins"), catalytic domain Matrix metalloproteases, catalytic domain Gelatinase A Human (Homo sapiens) [TaxId: 9606]
D217-277 d1eakd3 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
D278-335 d1eakd4 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]
D336-393 d1eakd5 Small proteins Kringle-like Kringle-like Fibronectin type II module Gelatinase A (MMP-2) type II modules Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1eakA01 Mainly Alpha Orthogonal Bundle Muramoyl-pentapeptide Carboxypeptidase; domain 1 Muramoyl-pentapeptide Carboxypeptidase, domain 1
A2 1eakA02 Alpha Beta 3-Layer(aba) Sandwich Collagenase (Catalytic Domain) Collagenase (Catalytic Domain)
A3 1eakA03 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
A4 1eakA04 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
A5 1eakA05 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
B1 1eakB01 Mainly Alpha Orthogonal Bundle Muramoyl-pentapeptide Carboxypeptidase; domain 1 Muramoyl-pentapeptide Carboxypeptidase, domain 1
B2 1eakB02 Alpha Beta 3-Layer(aba) Sandwich Collagenase (Catalytic Domain) Collagenase (Catalytic Domain)
B3 1eakB03 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
B4 1eakB04 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
B5 1eakB05 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
C1 1eakC01 Mainly Alpha Orthogonal Bundle Muramoyl-pentapeptide Carboxypeptidase; domain 1 Muramoyl-pentapeptide Carboxypeptidase, domain 1
C2 1eakC02 Alpha Beta 3-Layer(aba) Sandwich Collagenase (Catalytic Domain) Collagenase (Catalytic Domain)
C3 1eakC03 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
C4 1eakC04 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
C5 1eakC05 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
D1 1eakD01 Mainly Alpha Orthogonal Bundle Muramoyl-pentapeptide Carboxypeptidase; domain 1 Muramoyl-pentapeptide Carboxypeptidase, domain 1
D2 1eakD02 Alpha Beta 3-Layer(aba) Sandwich Collagenase (Catalytic Domain) Collagenase (Catalytic Domain)
D3 1eakD03 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
D4 1eakD04 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)
D5 1eakD05 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B)

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D 72 KDA TYPE IV COLLAGENASE (1EAK:A,B,C,D)
P,R INHIBITOR PEPTIDE (1EAK:P,R)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description