Macromolecule Annotations for the Entities in PDB 1E7P

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A458-655 d1e7pa1 All alpha proteins Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
A1-250,A372-457 d1e7pa2 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
A251-371 d1e7pa3 Alpha and beta proteins (a+b) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
B107-239 d1e7pb1 All alpha proteins Globin-like alpha-helical ferredoxin Fumarate reductase/Succinate dehydogenase iron- sulfur protein, C-terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
B1-106 d1e7pb2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Fumarate reductase iron-sulfur protein, N- terminal domain Wolinella succinogenes [TaxId: 844]
C d1e7pc_ Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits Fumarate reductase respiratory complex cytochrome b subunit, FrdC Fumarate reductase respiratory complex cytochrome b subunit, FrdC Wolinella succinogenes [TaxId: 844]
D458-655 d1e7pd1 All alpha proteins Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
D1-250,D372-457 d1e7pd2 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
D251-371 d1e7pd3 Alpha and beta proteins (a+b) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
E107-239 d1e7pe1 All alpha proteins Globin-like alpha-helical ferredoxin Fumarate reductase/Succinate dehydogenase iron- sulfur protein, C-terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
E1-106 d1e7pe2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Fumarate reductase iron-sulfur protein, N- terminal domain Wolinella succinogenes [TaxId: 844]
F d1e7pf_ Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits Fumarate reductase respiratory complex cytochrome b subunit, FrdC Fumarate reductase respiratory complex cytochrome b subunit, FrdC Wolinella succinogenes [TaxId: 844]
G458-655 d1e7pg1 All alpha proteins Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
G1-250,G372-457 d1e7pg2 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
G251-371 d1e7pg3 Alpha and beta proteins (a+b) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
H107-239 d1e7ph1 All alpha proteins Globin-like alpha-helical ferredoxin Fumarate reductase/Succinate dehydogenase iron- sulfur protein, C-terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
H1-106 d1e7ph2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Fumarate reductase iron-sulfur protein, N- terminal domain Wolinella succinogenes [TaxId: 844]
I d1e7pi_ Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits Fumarate reductase respiratory complex cytochrome b subunit, FrdC Fumarate reductase respiratory complex cytochrome b subunit, FrdC Wolinella succinogenes [TaxId: 844]
J458-655 d1e7pj1 All alpha proteins Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
J1-250,J372-457 d1e7pj2 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N- terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
J251-371 d1e7pj3 Alpha and beta proteins (a+b) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
K107-239 d1e7pk1 All alpha proteins Globin-like alpha-helical ferredoxin Fumarate reductase/Succinate dehydogenase iron- sulfur protein, C-terminal domain Fumarate reductase Wolinella succinogenes [TaxId: 844]
K1-106 d1e7pk2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Fumarate reductase iron-sulfur protein, N- terminal domain Wolinella succinogenes [TaxId: 844]
L d1e7pl_ Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits Fumarate reductase respiratory complex cytochrome b subunit, FrdC Fumarate reductase respiratory complex cytochrome b subunit, FrdC Wolinella succinogenes [TaxId: 844]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1e7pA01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
A2 1e7pA02 Alpha Beta Alpha-Beta Complex Flavocytochrome C3; Chain A, domain 1 Flavocytochrome C3; Chain A, domain 1
A3 1e7pA03 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase; Chain G, domain 1
B1 1e7pB01 Alpha Beta Roll Ubiquitin-like (UB roll)
B2 1e7pB02 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2
C 1e7pC00 Mainly Alpha Up-down Bundle 3 helical TM bundles of succinate and fumarate reductases Fumarate reductase respiratory complex transmembrane subunits
D1 1e7pD01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
D2 1e7pD02 Alpha Beta Alpha-Beta Complex Flavocytochrome C3; Chain A, domain 1 Flavocytochrome C3; Chain A, domain 1
D3 1e7pD03 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase; Chain G, domain 1
E1 1e7pE01 Alpha Beta Roll Ubiquitin-like (UB roll)
E2 1e7pE02 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2
F 1e7pF00 Mainly Alpha Up-down Bundle 3 helical TM bundles of succinate and fumarate reductases Fumarate reductase respiratory complex transmembrane subunits
G1 1e7pG01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
G2 1e7pG02 Alpha Beta Alpha-Beta Complex Flavocytochrome C3; Chain A, domain 1 Flavocytochrome C3; Chain A, domain 1
G3 1e7pG03 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase; Chain G, domain 1
H1 1e7pH01 Alpha Beta Roll Ubiquitin-like (UB roll)
H2 1e7pH02 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2
I 1e7pI00 Mainly Alpha Up-down Bundle 3 helical TM bundles of succinate and fumarate reductases Fumarate reductase respiratory complex transmembrane subunits
J1 1e7pJ01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
J2 1e7pJ02 Alpha Beta Alpha-Beta Complex Flavocytochrome C3; Chain A, domain 1 Flavocytochrome C3; Chain A, domain 1
J3 1e7pJ03 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase; Chain G, domain 1
K1 1e7pK01 Alpha Beta Roll Ubiquitin-like (UB roll)
K2 1e7pK02 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2
L 1e7pL00 Mainly Alpha Up-down Bundle 3 helical TM bundles of succinate and fumarate reductases Fumarate reductase respiratory complex transmembrane subunits

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF02910 Succ_DH_flav_C Fumarate reductase flavoprotein C-term Domain This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases. PFAM PF02910
A PF00890 FAD_binding_2 FAD binding domain Family
B PF13085 Fer2_3 2Fe-2S iron-sulfur cluster binding domain Domain The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which abeta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. PFAM PF13085
C PF01127 Sdh_cyt Succinate dehydrogenase/Fumarate reductase transmembrane subunit Family
B PF13183 Fer4_8 4Fe-4S dicluster domain Domain Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters. PFAM PF13183

Protein Modification Annotation

Type PDB Residue Nr. Description