Macromolecule Annotations for the Entities in PDB 1E1C

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A2-560 d1e1ca1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Cobalamin (vitamin B12)-dependent enzymes Methylmalonyl-CoA mutase, N-terminal (CoA- binding) domain Methylmalonyl-CoA mutase alpha subunit, domain 1 Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
B20-475 d1e1cb1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Cobalamin (vitamin B12)-dependent enzymes Methylmalonyl-CoA mutase, N-terminal (CoA- binding) domain Methylmalonyl-CoA mutase beta subunit, domain 1 Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
C2-560 d1e1cc1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Cobalamin (vitamin B12)-dependent enzymes Methylmalonyl-CoA mutase, N-terminal (CoA- binding) domain Methylmalonyl-CoA mutase alpha subunit, domain 1 Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
D20-475 d1e1cd1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Cobalamin (vitamin B12)-dependent enzymes Methylmalonyl-CoA mutase, N-terminal (CoA- binding) domain Methylmalonyl-CoA mutase beta subunit, domain 1 Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
A561-728 d1e1ca2 Alpha and beta proteins (a/b) Flavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain Methylmalonyl-CoA mutase alpha subunit, C- terminal domain Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
B476-638 d1e1cb2 Alpha and beta proteins (a/b) Flavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain Methylmalonyl-CoA mutase beta subunit, C- terminal domain Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
C561-728 d1e1cc2 Alpha and beta proteins (a/b) Flavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain Methylmalonyl-CoA mutase alpha subunit, C- terminal domain Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
D476-638 d1e1cd2 Alpha and beta proteins (a/b) Flavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain Methylmalonyl-CoA mutase beta subunit, C- terminal domain Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF01642 MM_CoA_mutase Methylmalonyl-CoA mutase Family
A PF02310 B12-binding B12 binding domain Domain This domain binds to B12 (adenosylcobamide)[1-3], it is found in several enzymes, such as glutamate mutase Swiss:Q05488, methionine synthase Swiss:Q99707 and methylmalonyl-CoA mutase Swiss:P22033. It contains a conserved DxHxxGx(41)SxVx(26)GG motif, which is important for B12 binding [2]. PFAM PF02310
A PF01642 MM_CoA_mutase Methylmalonyl-CoA mutase Family

Protein Modification Annotation

Type PDB Residue Nr. Description