Macromolecule Annotations for the Entities in PDB 1DU3

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
D d1du3d_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
E d1du3e_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
F d1du3f_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
J d1du3j_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
K d1du3k_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
L d1du3l_ All beta proteins TNF-like TNF-like TNF-like Apoptosis-2 ligand, apo2l/TRAIL Human (Homo sapiens) [TaxId: 9606]
A21-61 d1du3a1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
A62-101 d1du3a2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
A102-123 d1du3a3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
B21-61 d1du3b1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
B62-101 d1du3b2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
B102-130 d1du3b3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
C21-61 d1du3c1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
C62-101 d1du3c2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
C102-123 d1du3c3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
G21-61 d1du3g1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
G62-101 d1du3g2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
G102-128 d1du3g3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
H21-61 d1du3h1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
H62-101 d1du3h2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
H102-123 d1du3h3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
I21-61 d1du3i1 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
I62-101 d1du3i2 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]
I102-123 d1du3i3 Small proteins TNF receptor-like TNF receptor-like TNF receptor-like Death receptor-5 (dr5) fragment Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1du3A01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
A2 1du3A02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
B1 1du3B01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
B2 1du3B02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
B3 1du3B03 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
C1 1du3C01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
C2 1du3C02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
D 1du3D00 Mainly Beta Sandwich Jelly Rolls
E 1du3E00 Mainly Beta Sandwich Jelly Rolls
F 1du3F00 Mainly Beta Sandwich Jelly Rolls
G1 1du3G01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
G2 1du3G02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
G3 1du3G03 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
H1 1du3H01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
H2 1du3H02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
I1 1du3I01 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
I2 1du3I02 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A; domain 2 Tumor Necrosis Factor Receptor, subunit A, domain 2
J 1du3J00 Mainly Beta Sandwich Jelly Rolls
K 1du3K00 Mainly Beta Sandwich Jelly Rolls
L 1du3L00 Mainly Beta Sandwich Jelly Rolls

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
D PF00229 TNF TNF(Tumour Necrosis Factor) family Domain PFAM PF00229
A PF00020 TNFR_c6 TNFR/NGFR cysteine-rich region Domain PFAM PF00020
A PF00020 TNFR_c6 TNFR/NGFR cysteine-rich region Domain PFAM PF00020

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,G,H,I DEATH RECEPTOR 5 (1DU3:A,B,C,G,H,I)
  • none
  • none
D,E,F,J,K,L TNF-RELATED APOPTOSIS INDUCING LIGAND (1DU3:D,E,F,J,K,L)

Protein Modification Annotation

Type PDB Residue Nr. Description