Macromolecule Annotations for the Entities in PDB 1DQB

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1dqbA01 Mainly Beta Ribbon Laminin Laminin
A2 1dqbA02 Mainly Beta Ribbon Laminin Laminin

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF09064 Tme5_EGF_like Thrombomodulin like fifth domain, EGF-like Domain Members of this family adopt a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C [1]. PFAM PF09064

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description