Macromolecule Annotations for the Entities in PDB 1DGI

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
3 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073
1 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073
2 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073
R PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
R PF08205 C2-set_2 CD80-like C2-set immunoglobulin domain Domain These domains belong to the immunoglobulin superfamily. PFAM PF08205

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
R POLIOVIRUS RECEPTOR (1DGI:R)
  • none
  • none
  • none
1 VP1 (1DGI:1)
  • none
2 VP2 (1DGI:2)
  • none
3 VP3 (1DGI:3)
  • none
4 VP4 (1DGI:4)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description