Macromolecule Annotations for the Entities in PDB 1DE4

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
C609-756 d1de4c1 All alpha proteins N-cbl like Transferrin receptor-like dimerisation domain Transferrin receptor-like dimerisation domain Transferrin receptor ectodomain, C-terminal domain Human (Homo sapiens) [TaxId: 9606]
F609-756 d1de4f1 All alpha proteins N-cbl like Transferrin receptor-like dimerisation domain Transferrin receptor-like dimerisation domain Transferrin receptor ectodomain, C-terminal domain Human (Homo sapiens) [TaxId: 9606]
I609-756 d1de4i1 All alpha proteins N-cbl like Transferrin receptor-like dimerisation domain Transferrin receptor-like dimerisation domain Transferrin receptor ectodomain, C-terminal domain Human (Homo sapiens) [TaxId: 9606]
A182-275 d1de4a1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Hemochromatosis protein Hfe, alpha-3 domain Human (Homo sapiens) [TaxId: 9606]
B d1de4b_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Human (Homo sapiens) [TaxId: 9606]
D182-275 d1de4d1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Hemochromatosis protein Hfe, alpha-3 domain Human (Homo sapiens) [TaxId: 9606]
E d1de4e_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Human (Homo sapiens) [TaxId: 9606]
G182-275 d1de4g1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Hemochromatosis protein Hfe, alpha-3 domain Human (Homo sapiens) [TaxId: 9606]
H d1de4h_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Human (Homo sapiens) [TaxId: 9606]
C190-382 d1de4c2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain PA domain PA domain Transferrin receptor ectodomain, apical domain Human (Homo sapiens) [TaxId: 9606]
F190-382 d1de4f2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain PA domain PA domain Transferrin receptor ectodomain, apical domain Human (Homo sapiens) [TaxId: 9606]
I190-382 d1de4i2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain PA domain PA domain Transferrin receptor ectodomain, apical domain Human (Homo sapiens) [TaxId: 9606]
C122-189,C383-608 d1de4c3 Alpha and beta proteins (a/b) Phosphorylase/hydrolase-like Zn-dependent exopeptidases FolH catalytic domain-like Transferrin receptor ectodomain, protease- like domain Human (Homo sapiens) [TaxId: 9606]
F122-189,F383-608 d1de4f3 Alpha and beta proteins (a/b) Phosphorylase/hydrolase-like Zn-dependent exopeptidases FolH catalytic domain-like Transferrin receptor ectodomain, protease- like domain Human (Homo sapiens) [TaxId: 9606]
I122-189,I383-608 d1de4i3 Alpha and beta proteins (a/b) Phosphorylase/hydrolase-like Zn-dependent exopeptidases FolH catalytic domain-like Transferrin receptor ectodomain, protease- like domain Human (Homo sapiens) [TaxId: 9606]
A4-181 d1de4a2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Hemochromatosis protein Hfe, alpha-1 and alpha- 2 domains Human (Homo sapiens) [TaxId: 9606]
D4-181 d1de4d2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Hemochromatosis protein Hfe, alpha-1 and alpha- 2 domains Human (Homo sapiens) [TaxId: 9606]
G4-181 d1de4g2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Hemochromatosis protein Hfe, alpha-1 and alpha- 2 domains Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1de4A01 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1 Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
A2 1de4A02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
B 1de4B00 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
C1 1de4C01 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidases
C2 1de4C02 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1
C3 1de4C03 Mainly Alpha Up-down Bundle Transcription Elongation Factor S-II; Chain A
D1 1de4D01 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1 Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
D2 1de4D02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
E 1de4E00 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
F1 1de4F01 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidases
F2 1de4F02 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1
F3 1de4F03 Mainly Alpha Up-down Bundle Transcription Elongation Factor S-II; Chain A
G1 1de4G01 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1 Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
G2 1de4G02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
H 1de4H00 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
I1 1de4I01 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidases
I2 1de4I02 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1
I3 1de4I03 Mainly Alpha Up-down Bundle Transcription Elongation Factor S-II; Chain A

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,D,G HEMOCHROMATOSIS PROTEIN (1DE4:A,D,G)
B,E,H BETA-2-MICROGLOBULIN (1DE4:B,E,H)
C,F,I TRANSFERRIN RECEPTOR (1DE4:C,F,I)

Protein Modification Annotation

Type PDB Residue Nr. Description