Macromolecule Annotations for the Entities in PDB 1DDO

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-194,A288-339 d1ddoa1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
B1-194,B288-339 d1ddob1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
C1-194,C288-339 d1ddoc1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
D1-194,D288-339 d1ddod1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
E1-194,E288-339 d1ddoe1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
F1-194,F288-339 d1ddof1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
G1-194,G288-339 d1ddog1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
H1-194,H288-339 d1ddoh1 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain D-aminoacid oxidase, N-terminal domain Pig (Sus scrofa) [TaxId: 9823]
A195-287 d1ddoa2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
B195-287 d1ddob2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
C195-287 d1ddoc2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
D195-287 d1ddod2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
E195-287 d1ddoe2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
F195-287 d1ddof2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
G195-287 d1ddog2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]
H195-287 d1ddoh2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain D-aminoacid oxidase-like D-aminoacid oxidase Pig (Sus scrofa) [TaxId: 9823]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1ddoA01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
A2 1ddoA02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
B1 1ddoB01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
B2 1ddoB02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
C1 1ddoC01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
C2 1ddoC02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
D1 1ddoD01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
D2 1ddoD02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
E1 1ddoE01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
E2 1ddoE02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
F1 1ddoF01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
F2 1ddoF02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
G1 1ddoG01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
G2 1ddoG02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2
H1 1ddoH01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain
H2 1ddoH02 Alpha Beta 2-Layer Sandwich D-Amino Acid Oxidase; Chain A, domain 2 D-Amino Acid Oxidase, subunit A, domain 2

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01266 DAO FAD dependent oxidoreductase Domain This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1. PFAM PF01266

Protein Modification Annotation

Type PDB Residue Nr. Description