Macromolecule Annotations for the Entities in PDB 1D9K

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1d9ka_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
E d1d9ke_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), alpha-chain [TaxId: 10090]
B d1d9kb_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
F d1d9kf_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) T-cell antigen receptor Mouse (Mus musculus), beta-chain [TaxId: 10090]
C82-182 d1d9kc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
D93-190 d1d9kd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
G82-182 d1d9kg1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
H93-190 d1d9kh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
C1-81 d1d9kc2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AK [TaxId: 10090]
D2-92 d1d9kd2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AK [TaxId: 10090]
G1-81 d1d9kg2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AK [TaxId: 10090]
H2-92 d1d9kh2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AK [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
C PF00993 MHC_II_alpha Class II histocompatibility antigen, alpha domain Domain PFAM PF00993
B PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
A PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
D PF00969 MHC_II_beta Class II histocompatibility antigen, beta domain Domain PFAM PF00969
C PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
D PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,E T-CELL RECEPTOR D10 (ALPHA CHAIN) (1D9K:A,E)
  • none
  • none
  • none
B,F T-CELL RECEPTOR D10 (BETA CHAIN) (1D9K:B,F)
  • none
  • none
  • none
C,G MHC I-AK A CHAIN (ALPHA CHAIN) (1D9K:C,G)
  • none
D,H MHC I-AK B CHAIN (BETA CHAIN) (1D9K:D,H)
  • none
P,Q CONALBUMIN PEPTIDE (1D9K:P,Q)
  • none
  • none
  • none
SUGAR (NAG-NAG) (1D9K:)
  • none
  • none
  • none
SUGAR (2-MER) (1D9K:)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description