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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1D8T
CRYSTAL STRUCTURE OF ELONGATION FACTOR, TU (EF-TU-MGGDP) COMPLEXED WITH GE2270A, A THIAZOLYL PEPTIDE ANTIBIOTIC
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Biological Assembly 1 (gz) (S)
Biological Assembly 2 (gz) (S)
Macromolecule Annotations for the Entities in PDB 1D8T
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A205-296
d1d8ta1
All beta proteins
Reductase/isomerase/elongation factor common domain
Translation proteins
Elongation factors
Elongation factor Tu (EF-Tu), domain 2
Escherichia coli [TaxId: 562]
B205-296
d1d8tb1
All beta proteins
Reductase/isomerase/elongation factor common domain
Translation proteins
Elongation factors
Elongation factor Tu (EF-Tu), domain 2
Escherichia coli [TaxId: 562]
A297-393
d1d8ta2
All beta proteins
Elongation factor/aminomethyltransferase common domain
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Elongation factor Tu (EF-Tu)
Escherichia coli [TaxId: 562]
B297-393
d1d8tb2
All beta proteins
Elongation factor/aminomethyltransferase common domain
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Elongation factor Tu (EF-Tu)
Escherichia coli [TaxId: 562]
A3-204
d1d8ta3
Alpha and beta proteins (a/b)
P-loop containing nucleoside triphosphate hydrolases
P-loop containing nucleoside triphosphate hydrolases
G proteins
Elongation factor Tu (EF-Tu), N-terminal (G) domain
Escherichia coli [TaxId: 562]
B9-204
d1d8tb3
Alpha and beta proteins (a/b)
P-loop containing nucleoside triphosphate hydrolases
P-loop containing nucleoside triphosphate hydrolases
G proteins
Elongation factor Tu (EF-Tu), N-terminal (G) domain
Escherichia coli [TaxId: 562]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1d8tA01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
P-loop containing nucleotide triphosphate hydrolases
A2
1d8tA02
Mainly Beta
Beta Barrel
Elongation Factor Tu (Ef-tu); domain 3
Translation factors
A3
1d8tA03
Mainly Beta
Beta Barrel
Elongation Factor Tu (Ef-tu); domain 3
Translation factors
B1
1d8tB01
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
P-loop containing nucleotide triphosphate hydrolases
B2
1d8tB02
Mainly Beta
Beta Barrel
Elongation Factor Tu (Ef-tu); domain 3
Translation factors
B3
1d8tB03
Mainly Beta
Beta Barrel
Elongation Factor Tu (Ef-tu); domain 3
Translation factors
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,B
ELONGATION FACTOR TU (1D8T:A,B)
Nucleotide Binding
RNA Binding
Translation Elongation Factor Activity
Gtpase Activity
Protein Binding
GTP Binding
Translation
Translational Elongation
Response to Antibiotic
Intracellular
Cytoplasm
Plasma Membrane
Membrane
C,D
THIOCILLIN GE2270 (1D8T:C,D)
none
Cytolysis
Defense Response to Bacterium
Extracellular Region
Protein Modification Annotation
Type
PDB Residue Nr.
Description