Macromolecule Annotations for the Entities in PDB 1D5Y

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A3-56 d1d5ya1 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
A57-121 d1d5ya2 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
B3-56 d1d5yb1 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
B57-121 d1d5yb2 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
C3-56 d1d5yc1 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
C57-121 d1d5yc2 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
D3-56 d1d5yd1 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
D57-121 d1d5yd2 All alpha proteins DNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator Rob transcription factor, N-terminal domain Escherichia coli [TaxId: 562]
A122-294 d1d5ya3 Alpha and beta proteins (a+b) Probable bacterial effector-binding domain Probable bacterial effector-binding domain Rob transcription factor, C-terminal domain Rob transcription factor, C-terminal domain Escherichia coli [TaxId: 562]
B122-294 d1d5yb3 Alpha and beta proteins (a+b) Probable bacterial effector-binding domain Probable bacterial effector-binding domain Rob transcription factor, C-terminal domain Rob transcription factor, C-terminal domain Escherichia coli [TaxId: 562]
C122-294 d1d5yc3 Alpha and beta proteins (a+b) Probable bacterial effector-binding domain Probable bacterial effector-binding domain Rob transcription factor, C-terminal domain Rob transcription factor, C-terminal domain Escherichia coli [TaxId: 562]
D122-294 d1d5yd3 Alpha and beta proteins (a+b) Probable bacterial effector-binding domain Probable bacterial effector-binding domain Rob transcription factor, C-terminal domain Rob transcription factor, C-terminal domain Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
M,O DNA (5'-D(*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*GP*AP*AP*TP*GP*TP*CP*AP*AP*AP*G)- 3') (1D5Y:M,O)
  • none
  • none
  • none
N,P DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*CP*AP*TP*TP*CP*AP*GP*TP*GP*CP*TP*GP*TP*C)- 3') (1D5Y:N,P)
  • none
  • none
  • none
A,B,C,D ROB TRANSCRIPTION FACTOR (1D5Y:A,B,C,D)

Protein Modification Annotation

Type PDB Residue Nr. Description