Macromolecule Annotations for the Entities in PDB 1D2E

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A251-348 d1d2ea1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
B251-348 d1d2eb1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
C251-348 d1d2ec1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
D251-348 d1d2ed1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
A349-451 d1d2ea2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
B349-451 d1d2eb2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
C349-451 d1d2ec2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
D349-451 d1d2ed2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
A55-250 d1d2ea3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
B55-250 d1d2eb3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
C55-250 d1d2ec3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
D55-250 d1d2ed3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00009 GTP_EFTU Elongation factor Tu GTP binding domain Domain This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. PFAM PF00009
A PF03143 GTP_EFTU_D3 Elongation factor Tu C-terminal domain Domain Elongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2]. PFAM PF03143
A PF03144 GTP_EFTU_D2 Elongation factor Tu domain 2 Domain Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain. PFAM PF03144

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D ELONGATION FACTOR TU (EF-TU) (1D2E:A,B,C,D)

Protein Modification Annotation

Type PDB Residue Nr. Description