Macromolecule Annotations for the Entities in PDB 1D2E

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A251-348 d1d2ea1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
B251-348 d1d2eb1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
C251-348 d1d2ec1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
D251-348 d1d2ed1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor Tu (EF-Tu), domain 2 Cow (Bos taurus), mitochondrial [TaxId: 9913]
A349-451 d1d2ea2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
B349-451 d1d2eb2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
C349-451 d1d2ec2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
D349-451 d1d2ed2 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor Tu (EF-Tu) Cow (Bos taurus), mitochondrial [TaxId: 9913]
A55-250 d1d2ea3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
B55-250 d1d2eb3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
C55-250 d1d2ec3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]
D55-250 d1d2ed3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor Tu (EF-Tu), N-terminal (G) domain Cow (Bos taurus), mitochondrial [TaxId: 9913]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF03144 GTP_EFTU_D2 Elongation factor Tu domain 2 Domain Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain. PFAM PF03144
A PF03143 GTP_EFTU_D3 Elongation factor Tu C-terminal domain Domain Elongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2]. PFAM PF03143
A PF00009 GTP_EFTU Elongation factor Tu GTP binding domain Domain This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. PFAM PF00009

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D ELONGATION FACTOR TU (EF-TU) (1D2E:A,B,C,D)

Protein Modification Annotation

Type PDB Residue Nr. Description