Macromolecule Annotations for the Entities in PDB 1CQJ

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-121 d1cqja1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains CoA-binding domain Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA- binding) domain Escherichia coli [TaxId: 562]
D1-121 d1cqjd1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains CoA-binding domain Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA- binding) domain Escherichia coli [TaxId: 562]
A122-286 d1cqja2 Alpha and beta proteins (a/b) Flavodoxin-like Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains Succinyl-CoA synthetase, alpha-chain, C-terminal domain Escherichia coli [TaxId: 562]
D122-286 d1cqjd2 Alpha and beta proteins (a/b) Flavodoxin-like Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains Succinyl-CoA synthetase, alpha-chain, C-terminal domain Escherichia coli [TaxId: 562]
B239-385 d1cqjb1 Alpha and beta proteins (a/b) Flavodoxin-like Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains Succinyl-CoA synthetase, beta-chain, C-terminal domain Escherichia coli [TaxId: 562]
E239-385 d1cqje1 Alpha and beta proteins (a/b) Flavodoxin-like Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains Succinyl-CoA synthetase, beta-chain, C-terminal domain Escherichia coli [TaxId: 562]
B1-238 d1cqjb2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Succinyl-CoA synthetase, beta-chain, N-terminal domain Succinyl-CoA synthetase, beta-chain, N-terminal domain Escherichia coli [TaxId: 562]
E1-238 d1cqje2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Succinyl-CoA synthetase, beta-chain, N-terminal domain Succinyl-CoA synthetase, beta-chain, N-terminal domain Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF08442 ATP-grasp_2 ATP-grasp domain Domain PFAM PF08442
B PF00549 Ligase_CoA CoA-ligase Domain This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, malate CoA ligase and ATP-citrate lyase. Some members of the family utilise ATP others use GTP. PFAM PF00549
A PF02629 CoA_binding CoA binding domain Domain This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. PFAM PF02629
A PF00549 Ligase_CoA CoA-ligase Domain This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, malate CoA ligase and ATP-citrate lyase. Some members of the family utilise ATP others use GTP. PFAM PF00549

Protein Modification Annotation

Type PDB Residue Nr. Description