Macromolecule Annotations for the Entities in PDB 1C0W

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A2-64 d1c0wa1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
B2-64 d1c0wb1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
C2-64 d1c0wc1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
D2-64 d1c0wd1 All alpha proteins DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
A65-140 d1c0wa2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
B65-140 d1c0wb2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
C65-140 d1c0wc2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
D65-140 d1c0wd2 All alpha proteins Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Iron-dependent repressor protein, dimerization domain Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
B147-226 d1c0wb3 All beta proteins SH3-like barrel C-terminal domain of transcriptional repressors FeoA-like Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
A165-223 d1c0wa3 All beta proteins SH3-like barrel C-terminal domain of transcriptional repressors FeoA-like Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
C165-222 d1c0wc3 All beta proteins SH3-like barrel C-terminal domain of transcriptional repressors FeoA-like Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]
D166-222 d1c0wd3 All beta proteins SH3-like barrel C-terminal domain of transcriptional repressors FeoA-like Diphtheria toxin repressor (DtxR) Corynebacterium diphtheriae [TaxId: 1717]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain Domain This family includes the Diphtheria toxin repressor. DNA binding is through a helix-turn-helix motif. PFAM PF01325
A PF02742 Fe_dep_repr_C Iron dependent repressor, metal binding and dimerisation domain Domain This family includes the Diphtheria toxin repressor. PFAM PF02742

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
E DNA (5'-D(P*AP*TP*TP*AP*GP*GP*TP*TP*AP*GP*CP*CP*TP*AP*CP*CP*CP*TP*AP*AP*T)- 3') (1C0W:E)
  • none
  • none
  • none
F DNA (5'-D(P*AP*TP*TP*AP*GP*GP*TP*TP*AP*GP*GP*CP*TP*AP*CP*CP*CP*TP*AP*AP*T)- 3') (1C0W:F)
  • none
  • none
  • none
A,B,C,D DIPHTHERIA TOXIN REPRESSOR (1C0W:A,B,C,D)

Protein Modification Annotation

Type PDB Residue Nr. Description