Macromolecule Annotations for the Entities in PDB 1BQH

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
G d1bqhg_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) CD8 Mouse (Mus musculus) [TaxId: 10090]
H d1bqhh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) CD8 Mouse (Mus musculus) [TaxId: 10090]
I d1bqhi_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) CD8 Mouse (Mus musculus) [TaxId: 10090]
K d1bqhk_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) CD8 Mouse (Mus musculus) [TaxId: 10090]
A182-274 d1bqha1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Mouse (Mus musculus) [TaxId: 10090]
B d1bqhb_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Mouse (Mus musculus) [TaxId: 10090]
D182-274 d1bqhd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class I MHC, alpha-3 domain Mouse (Mus musculus) [TaxId: 10090]
E d1bqhe_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) beta2-microglobulin Mouse (Mus musculus) [TaxId: 10090]
A1-181 d1bqha2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Mouse (Mus musculus), H-2KB [TaxId: 10090]
D1-181 d1bqhd2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains Mouse (Mus musculus), H-2KB [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
G PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
A PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
B PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
A PF00129 MHC_I Class I Histocompatibility antigen, domains alpha 1 and 2 Domain PFAM PF00129

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,D PROTEIN (H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN) (1BQH:A,D)
  • none
  • none
  • none
B,E PROTEIN (BETA-2-MICROGLOBULIN ) (1BQH:B,E)
C,F PROTEIN (VSV8) (1BQH:C,F)
  • none
  • none
  • none
G,H,I,K PROTEIN (CD8A OR LYT2 OR LYT-2) (1BQH:G,H,I,K)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description