Macromolecule Annotations for the Entities in PDB 1B25

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A211-619 d1b25a1 All alpha proteins Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
B211-619 d1b25b1 All alpha proteins Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
C211-619 d1b25c1 All alpha proteins Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
D211-619 d1b25d1 All alpha proteins Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
A1-210 d1b25a2 Alpha and beta proteins (a+b) Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
B1-210 d1b25b2 Alpha and beta proteins (a+b) Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
C1-210 d1b25c2 Alpha and beta proteins (a+b) Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]
D1-210 d1b25d2 Alpha and beta proteins (a+b) Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain Formaldehyde ferredoxin oxidoreductase Archaeon Pyrococcus furiosus [TaxId: 2261]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1b25A01 Alpha Beta 4-Layer Sandwich Aldehyde Ferredoxin Oxidoreductase; A, domain 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
A2 1b25A02 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2
A3 1b25A03 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 3 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 3
B1 1b25B01 Alpha Beta 4-Layer Sandwich Aldehyde Ferredoxin Oxidoreductase; A, domain 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
B2 1b25B02 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2
B3 1b25B03 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 3 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 3
C1 1b25C01 Alpha Beta 4-Layer Sandwich Aldehyde Ferredoxin Oxidoreductase; A, domain 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
C2 1b25C02 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2
C3 1b25C03 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 3 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 3
D1 1b25D01 Alpha Beta 4-Layer Sandwich Aldehyde Ferredoxin Oxidoreductase; A, domain 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
D2 1b25D02 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2
D3 1b25D03 Mainly Alpha Orthogonal Bundle Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 3 Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01314 AFOR_C Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Domain Aldehyde ferredoxin oxidoreductase (AOR) catalyses the reversible oxidation of aldehydes to their corresponding carboxylic acids with their accompanying reduction of the redox protein ferredoxin. This family is composed of two structural domains that bind the tungsten cofactor via DXXGL(C/D) motifs. In addition to maintaining specific binding interactions with the cofactor, another role for domains 2 and 3 may be to regulate substrate access to AOR [1]. PFAM PF01314
A PF02730 AFOR_N Aldehyde ferredoxin oxidoreductase, N-terminal domain Domain Aldehyde ferredoxin oxidoreductase (AOR) catalyses the reversible oxidation of aldehydes to their corresponding carboxylic acids with their accompanying reduction of the redox protein ferredoxin. This domain interacts with the tungsten cofactor [1]. PFAM PF02730

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation

Type PDB Residue Nr. Description