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Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7
Biology and Chemistry Report
4LDX
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSCRIPTION/DNA
    Text protein-dna complex, Transcription factor, promotor DNA, nucleus, TRANSCRIPTION-DNA complex

    Polymeric Molecules

    Chain A,B
    Description Auxin response factor 1 
    Fragment DNA Binding Domain, UNP residues 1-355 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 41182.8 
    Source Method genetically manipulated  
    Chain C
    Description ER7, forward sequence 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6429.2 
    Source Method synthetic  
    Chain D
    Description ER7, reverse sequence 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6456.3 
    Source Method synthetic  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B ARFA_ARATH O23664     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    9725   Response to Hormone  Any Process That Results in a Change in State or Activity of a Cell or an Organism (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Hormone Stimulus. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Mouse Ear Cress Thale Cress
    Scientific Name Arabidopsis thaliana  
    Gene arf1, at1g59750, f23h11.7
    Host Scientific Name Escherichia coli  
    Host Strain Rosetta De3
    Host Vector Type Plasmid
    Host Plasmid Name ptwin1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 - 842268     auxin response factor 1 ARF1