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Crystal structure of the DNA binding domain of A. thailana auxin response factor 1
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text Transcription Factor, DNA binding, Nucleus, TRANSCRIPTION

    Polymeric Molecules

    Chain A
    Description Auxin response factor 1 
    Fragment DNA Binding Domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 41079.7 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CL  CHLORIDE ION  Cl   35.45  View 
    FMT  FORMIC ACID  C H2 O2   46.03  View 
    IOD  IODIDE ION  I   126.90  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A ARFA_ARATH Q8L7G0     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    9725   Response to Hormone  Any Process That Results in a Change in State or Activity of a Cell or an Organism (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Hormone Stimulus. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 

  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Mouse Ear Cress Thale Cress
    Scientific Name Arabidopsis thaliana  
    Gene arf1, at1g59750, f23h11.7
    Host Scientific Name Escherichia coli  
    Host Strain Rosetta De3
    Host Vector Type Plasmid
    Host Plasmid Name pTWIN1

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 - 842268     auxin response factor 1 ARF1