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Crystal structure of PKZ Zalpha in complex with ds(CG)6 (hexagonal form)
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text wHTH, Zalpha, ZBD, Kinase, innate immunity, Z-DNA, Z-RNA, eIF2a, TRANSFERASE-DNA complex

    Polymeric Molecules

    Chain A,B
    Description Protein kinase containing Z-DNA binding domains 
    Fragment Zalpha domain, UNP residues 5-70 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 8450.7 
    Source Method genetically manipulated  
    Entity Name Uncharacterized protein, Z-DNA binding protein kinase 
    Chain C
    Description 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3969.6 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ACT  ACETATE ION  C2 H3 O2   59.04  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B Q5NE14_DANRE Q5NE14     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3726   Double Stranded RNA Adenosine Deaminase Activity  Catalysis of the Reaction: Adenosine + H2o = Inosine + Nh3 in a Double Stranded RNA Molecule. 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Leopard Danio Zebra Danio Zebra Fish
    Scientific Name Danio rerio  
    Gene pkz
    Host Scientific Name Escherichia coli  
    Host Strain Bl21 (de3)
    Host Plasmid Name pET28b