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An Information Portal to 105097 Biological Macromolecular Structures

Crystal structure of Rv2606c
Biology and Chemistry Report
4JDY
  •   Structure Details   Hide

    Structure Keywords

    Keywords LYASE
    Text (beta/alpha)8-barrel, LYASE

    Polymeric Molecules

    Chain A,B,C
    Description Pyridoxal biosynthesis lyase PdxS 
    Fragment UNP residues 11-274 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 27853.2 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C PDXS_MYCTU L0TCW3     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C  4      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    42823   Pyridoxal Phosphate Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Pyridoxal Phosphate Pyridoxal Phosphorylated At the Hydroxymethyl Group of C 5 the Active Form of Vitamin B6. 
    3824   Catalytic Activity  Catalysis of a Biochemical Reaction At Physiological Temperatures. in Biologically Catalyzed Reactions the Reactants Are Known As Substrates and the Catalysts Are Naturally Occurring Macromolecular Substances Known As Enzymes. Enzymes Possess Specific Binding Sites For Substrates and Are Usually Composed Wholly or Largely of Protein But RNA That Has Catalytic Activity (ribozyme) Is Often Also Regarded As Enzymatic. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C
    Scientific Name Mycobacterium tuberculosis  
    Gene pdxs, rv2606c, mt2681, mtcy1a10.27
    Host Scientific Name Escherichia coli  
    Host Strain B834
    Host Vector Type Plasmid
    Host Plasmid Name pProEX HTa