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An Information Portal to 105212 Biological Macromolecular Structures

SETD7 in complex with inhibitor PF-5426 and S-adenosyl-methionine
Biology and Chemistry Report
4JDS
  •   Structure Details   Hide

    Structure Keywords

    Keywords transferase/transferase inhibitor
    Text SETD7, SAM, PF-5426, Structural Genomics Consortium, SGC, Methyltransferase, SET domain, histone modification, transcription regulation, histone lysine methyltransferase, inhibitor, S-adenosyl-L-methionine, transferase-transferase inhibitor complex

    Polymeric Molecules

    Chain A,B,C,D
    Description Histone-lysine N-methyltransferase SETD7 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 29684.2 
    Source Method genetically manipulated  
    Entity Name Histone H3-K4 methyltransferase SETD7, H3-K4-HMTase SETD7, Lysine N-methyltransferase 7, SET domain-containing protein 7, SET7/9 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    1L4  N-[(2R)-3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl]-8-fluoro-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide  C23 H25 F N4 O3 S   456.53  View 
    SAM  S-ADENOSYLMETHIONINE  C15 H22 N6 O5 S   398.44  View 
    UNX  UNKNOWN ATOM OR ION  X   0.00  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D SETD7_HUMAN B5WWL3     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C D  2.1.1.43      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    34968   Histone Lysine Methylation  The Modification of a Histone by Addition of a Methyl Group to a Lysine Residue. 
    5694   Chromosome  A Structure Composed of a Very Long Molecule of DNA and Associated Proteins (e.g. Histones) That Carries Hereditary Information. 
    18024   Histone Lysine N Methyltransferase Activity  Catalysis of the Reaction: S Adenosyl L Methionine + Histone L Lysine = S Adenosyl L Homocysteine + Histone N6 Methyl L Lysine. the Methylation of Peptidyl Lysine in Histones Forms N6 Methyl L Lysine N6 N6 Dimethyl L Lysine and N6 N6 N6 Trimethyl L Lysine Derivatives. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D
    Common Name Human
    Scientific Name Homo sapiens  
    Gene setd7, kiaa1717, kmt7, set7, set9
    Host Scientific Name Escherichia coli  
    Host Strain Bl21 V2r Prare2
    Host Vector Type Plasmid
    Host Plasmid Name pET28


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    4 4q28 80854     SET domain containing (lysine methyltransferase) 7 SETD7