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Structure of Peptidyl- tRNA Hydrolase from Acinetobacter baumannii at 1.90 A resolution
Biology and Chemistry Report
4IKO
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text Peptidyl-tRNA hydrolase, enzyme, Molecular Conformation, Inhibition, HYDROLASE

    Polymeric Molecules

    Chain A
    Description Peptidyl-tRNA hydrolase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 20968.1 
    Source Method genetically manipulated  
    Entity Name PTH 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ACT  ACETATE ION  C2 H3 O2   59.04  View 
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    PEG  DI(HYDROXYETHYL)ETHER  C4 H10 O3   106.12  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A D0C9L6_ACIBA D0C9L6     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.1.1.29      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6412   Translation  The Cellular Metabolic Process in Which a Protein Is Formed Using the Sequence of a Mature MRNA Molecule to Specify the Sequence of Amino Acids in a Polypeptide Chain. Translation Is Mediated by the Ribosome and Begins with the Formation of a Ternary Complex Between Aminoacylated Initiator Methionine TRNA GTP and Initiation Factor 2 Which Subsequently Associates with the Small Subunit of the Ribosome and an Mrna. Translation Ends with the Release of a Polypeptide Chain From the Ribosome. 
    5737   Cytoplasm  All of the Contents of a Cell Excluding the Plasma Membrane and Nucleus But Including Other Subcellular Structures. 
    4045   Aminoacyl TRNA Hydrolase Activity  Catalysis of the Reaction: N Substituted Aminoacyl TRNA + H2o = N Substituted Amino Acid + Trna. 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Scientific Name Acinetobacter baumannii  
    Strain ATCC 19606
    Gene pth
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name pET28a