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Crystal structure of HCV NS3/NS4A protease complexed with compound 4
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords Hydrolase/Hydrolase inhibitor
    Text Hepatitis C Virus, NS3, NS4A, protein-inhibitor complex compound 4, serine protease, Hydrolase-Hydrolase inhibitor complex

    Polymeric Molecules

    Chain A,B
    Description Genome polyprotein 
    Fragment NS3 protease domain (UNP Residues 1027-1206) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 19794.9 
    Source Method genetically manipulated  
    Entity Name Core protein p21, Capsid protein C, p21, Core protein p19, Envelope glycoprotein E1, gp32, gp35, Envelope glycoprotein E2, NS1, gp68, gp70, p7, Protease NS2-3, p23, Serine protease NS3, Hepacivirin, NS3P, p70, Non-structural protein 4A, NS4A, p8, Non-structural protein 4B, NS4B, p27, Non-structural protein 5A, NS5A, p56, RNA-directed RNA polymerase, NS5B, p68 
    Chain C,D
    Description HCV non-structural protein 4A 
    Fragment NS3 interacting peptide (UNP Residues 1678-1691) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 1815.3 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    1BV  (2R,6S,7E,10E,13aR,14aR,16aS)-2-{[7-methoxy-8-methyl-2-(propan-2-yloxy)quinolin-4-yl]oxy}-N-[(1-methylcyclopropyl)sulfonyl]-6-{[(1-methyl-1H-pyrazol-3-yl)carbonyl]amino}-5,16-dioxo-1,2,3,6,9,12,13,13a,14,15,16,16a-dodecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecine-14a(5H)-carboxamide  C41 H51 N7 O9 S   817.95  View 
    NA  SODIUM ION  Na   22.99  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B POLG_HCVJA P26662     
    C,D POLG_HCVJA P26662     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B      
    A B      
    A B  3.4.22      
    A B      
    A B      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6508   Proteolysis  The Hydrolysis of Proteins Into Smaller Polypeptides And/or Amino Acids by Cleavage of Their Peptide Bonds. 
    19087   Transformation of Host Cell by Virus  Any Virus Induced Change in the Morphological Biochemical or Growth Parameters of a Cell. 
    8236   Serine Type Peptidase Activity  Catalysis of the Hydrolysis of Peptide Bonds in a Polypeptide Chain by a Catalytic Mechanism That Involves a Catalytic Triad Consisting of a Serine Nucleophile That Is Activated by a Proton Relay Involving an Acidic Residue (e.g. Aspartate or Glutamate) and a Basic Residue (usually Histidine). 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Hcv
    Scientific Name Hepatitis c virus  
    Gene polg_hcvja
    Host Scientific Name Escherichia coli