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An Information Portal to 110790 Biological Macromolecular Structures

Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design
Biology and Chemistry Report
4HW4
  •   Structure Details   Hide

    Structure Keywords

    Keywords APOPTOSIS
    Text Anti-apoptotic protein, BH3 peptides, APOPTOSIS

    Polymeric Molecules

    Chain A,B
    Description Induced myeloid leukemia cell differentiation protein Mcl-1 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17850.4 
    Source Method genetically manipulated  
    Entity Name Bcl-2-like protein 3, Bcl2-L-3, Bcl-2-related protein EAT/mcl1, mcl1/EAT 
    Chain C,D
    Description Mcl-1 BH3 peptide 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 1849.1 
    Source Method synthetic  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B MCL1_HUMAN Q07820     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    42981   Regulation of Apoptotic Process  Any Process That Modulates the Occurrence or Rate of Cell Death by Apoptotic Process. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene mcl1, bcl2l3
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q21 4170     myeloid cell leukemia 1 MCL1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs2737820 LS-SNP   dbSNP   A 173 E - > D Helix 28% (Intermediate) 1 150551488
    rs201906883 LS-SNP   dbSNP   A 178 S - > A Helix 0% (Buried) 1 150551475
    rs149195238 LS-SNP   dbSNP   A 187 R - > Q Helix 39% (Exposed) 1 150551447
    rs76955524 LS-SNP   dbSNP   A 196 T - > A Coil 101% (Exposed) 1 150551421
    rs140911000 LS-SNP   dbSNP   A 206 S - > G Helix 0% (Buried) 1 150551391
    rs11580946 LS-SNP   dbSNP   A 227 A - > V Helix 16% (Intermediate) 1 150551327
    rs140449444 LS-SNP   dbSNP   A 231 M - > L Helix 0% (Buried) 1 150550965
    rs201430561 LS-SNP   dbSNP   A 247 S - > F Helix 13% (Intermediate) 1 150550916
    rs142581495 LS-SNP   dbSNP   A 284 E - > Q 3/10 Helix 33% (Intermediate) 1 150550806
    rs150698207 LS-SNP   dbSNP   A 299 V - > L Helix 7% (Buried) 1 150550761
    rs138470363 LS-SNP   dbSNP   A 299 V - > G Helix 7% (Buried) 1 150550760
    rs12036622 LS-SNP   dbSNP   A 322 E - > K Coil 39% (Exposed) 1 150549940