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Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin
Biology and Chemistry Report
4HFU
  •   Structure Details   Hide

    Structure Keywords

    Keywords VIRAL PROTEIN/IMMUNE SYSTEM
    Text VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex

    Polymeric Molecules

    Chain A
    Description Hemagglutinin HA1 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 36573.7 
    Source Method genetically manipulated  
    Chain B
    Description Hemagglutinin HA2 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 20139.4 
    Source Method genetically manipulated  
    Chain H
    Description Fab 8M2 heavy chain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23988.9 
    Source Method genetically manipulated  
    Chain L
    Description Fab 8M2 light chain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23449.1 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A HEMA_I57A0 P03451     
    B HEMA_I57A0 P03451     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    Immune Epitopes (B-cell and T-Cell)

    Immune Epitope Database (IEDB)
    Epitope ID 181067    
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    19064   Fusion of Virus Membrane with Host Plasma Membrane  Fusion of a Viral Membrane with the Host Cell Membrane During Viral Entry. Results in Release of the Virion Contents Into the Cytoplasm. 
    19031   Viral Envelope  The Lipid Bilayer of a Virion That Surrounds the Protein Capsid. May Also Contain Glycoproteins. 
    46789   Host Cell Surface Receptor Binding  Interacting Selectively and Non Covalently with a Receptor On the Host Cell Surface. 
    Chain B
    GO ID   Ontology GO Term Definition
    19064   Fusion of Virus Membrane with Host Plasma Membrane  Fusion of a Viral Membrane with the Host Cell Membrane During Viral Entry. Results in Release of the Virion Contents Into the Cytoplasm. 
    19031   Viral Envelope  The Lipid Bilayer of a Virion That Surrounds the Protein Capsid. May Also Contain Glycoproteins. 
    46789   Host Cell Surface Receptor Binding  Interacting Selectively and Non Covalently with a Receptor On the Host Cell Surface. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain L
    Common Name Human
    Scientific Name Homo sapiens  
    Host Common Name Human
    Host Scientific Name Homo sapiens  
    Host Cell Line Hek 293f
    Host Vector Type Plasmid
    Host Plasmid Name pEE12.4


    Chain H
    Common Name Human
    Scientific Name Homo sapiens  
    Host Common Name Human
    Host Scientific Name Homo sapiens  
    Host Cell Line Hek 293f
    Host Vector Type Plasmid
    Host Plasmid Name pEE6.4


    Chain B
    Scientific Name Influenza a virus  
    Strain A/JAPAN/305+/1957(H2N2)
    Gene ha
    Host Common Name Cabbage Looper
    Host Scientific Name Trichoplusia ni  
    Host Cell Line Hi5
    Host Vector Type Autographa Californica Nucleopolyhedrovirus
    Host Plasmid Name pFastBac


    Chain A
    Scientific Name Influenza a virus  
    Strain A/JAPAN/305+/1957(H2N2)
    Gene ha
    Host Common Name Cabbage Looper
    Host Scientific Name Trichoplusia ni  
    Host Cell Line Hi5
    Host Vector Type Autographa Californica Nucleopolyhedrovirus
    Host Plasmid Name pFastBac