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PHF1 Tudor in complex with H3K36me3
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text Protein-peptide complex, Tudor, Histone binding, H3K36me3, NA, Nucleus, TRANSCRIPTION

    Polymeric Molecules

    Chain A,B
    Description PHD finger protein 1 
    Fragment Tudor domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 6623.6 
    Source Method genetically manipulated  
    Entity Name Protein PHF1, Polycomb-like protein 1, hPCl1 
    Chain C,D
    Description H3L-like histone 
    Fragment H3K36me3 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 1112.3 
    Source Method synthetic  

  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B PHF1_HUMAN O43189     
    C,D Q6TXQ4_HUMAN Q6TXQ4     

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene phf1, pcl1
    Host Scientific Name Escherichia coli  

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    6 6p21.3 5252     PHD finger protein 1 PHF1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs6934613 LS-SNP   dbSNP   A 42 T - > S Turn 87% (Exposed) 6_ssto_hap7 4860412