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DNA binding by GATA transcription factor-complex 1
Biology and Chemistry Report
4HCA
  •   Structure Details   Hide

    Structure Keywords

    Keywords Transcription/DNA
    Text zinc finger, GATA transcription factor, DNA bridging, Transcription-DNA complex

    Polymeric Molecules

    Chain A
    Description Trans-acting T-cell-specific transcription factor GATA-3 
    Fragment UNP residues 260 -368 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 12893.9 
    Source Method genetically manipulated  
    Entity Name GATA-binding factor 3 
    Chain X
    Description DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*CP*G)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6142.1 
    Source Method synthetic  
    Chain Y
    Description DNA (5'-D(*TP*TP*CP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*A)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6124.0 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A GATA3_HUMAN P23771     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Gene gata3
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10p15 2625     GATA binding protein 3 GATA3    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs104894163 LS-SNP   dbSNP   A 275 W - > R Coil 26% (Intermediate) 10 8106000
    rs104894165 LS-SNP   dbSNP   A 353 R - > S Coil 11% (Intermediate) 10 8115710 ZN