An Information Portal to 111558 Biological Macromolecular Structures

Crystal structure of a FHA domain of kanadaptin (SLC4A1AP) from Homo sapiens at 1.55 A resolution
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text FHA domain of PF00498, mRNA processing, nucleus, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, SIGNAL TRANSDUCTION, PEPTIDE BINDING PROTEIN

    Polymeric Molecules

    Chain A,B
    Description Kanadaptin 
    Fragment FHA domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14102.1 
    Source Method genetically manipulated  
    Entity Name Human lung cancer oncogene 3 protein, HLC-3, Kidney anion exchanger adapter protein, Solute carrier family 4 anion exchanger member 1 adapter protein 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    SO4  SULFATE ION  O4 S   96.06  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene hlc3, nm_018158, slc4a1ap
    Host Scientific Name Escherichia coli  
    Host Strain Rosetta
    Host Vector Type Plasmid
    Host Plasmid Name SGC_M

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    2 2p23.3 22950     solute carrier family 4 (anion exchanger), member 1, adaptor protein SLC4A1AP    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs147092779 LS-SNP   dbSNP   A 153 P - > HL Bend 35% (Intermediate) 2 27887077
    rs9679004 LS-SNP   dbSNP   A 181 R - > C Beta Ladder 42% (Exposed) 2 27887160
    rs148365573 LS-SNP   dbSNP   A 204 P - > A Turn 74% (Exposed) 2 27887229
    rs111609268 LS-SNP   dbSNP   A 214 Q - > R Beta Ladder 0% (Buried) 2 27887260
    rs114376890 LS-SNP   dbSNP   A 247 T - > I Beta Ladder 67% (Exposed) 2 27887359