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Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with (E)-3-(3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)- 4-fluorophenoxy)-5-fluorophenyl)acrylonitrile (JLJ506), A Non-nucleoside inhibitor
Biology and Chemistry Report
4H4O
  •   Structure Details   Hide

    Structure Keywords

    Keywords Hydrolase/Hydrolase inhibitor
    Text Polymerase, Transferase, Hydrolase/inhibitor, Rnase, Hydrolase-Hydrolase inhibitor complex

    Polymeric Molecules

    Chain A
    Description Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT 
    Fragment HIV-1 Reverse Transcriptase, p66 Subunit 
    Mutation C280S, K172A, K173A 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 63990.0 
    Source Method genetically manipulated  
    Entity Name Gag-Pol polyprotein 
    Chain B
    Description Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT 
    Fragment HIV-1 Reverse Transcriptase, p51 Subunit 
    Mutation C280S 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 50040.1 
    Source Method genetically manipulated  
    Entity Name Gag-Pol polyprotein 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    506  (2E)-3-(3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-5-fluorophenyl)prop-2-enenitrile  C21 H15 F2 N3 O4   411.36  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A POL_HV1B1 P03366     
    B POL_HV1B1 P03366     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.7.7.49      
    2.7.7.7      
    3.1.26.13      
    2.7.7.49      
    2.7.7.7      
    3.1.26.13      
     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Hiv 1
    Scientific Name Human immunodeficiency virus type 1  
    Strain BH10 ISOLATE
    Details Genus Name: Lentivirus
    Gene p51 rt
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pCDF-2


    Chain A
    Common Name Hiv 1
    Scientific Name Human immunodeficiency virus type 1 bh10  
    Strain BH10 ISOLATE
    Details Genus Name: Lentivirus
    Gene p66 rt
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pCDF-2