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Granulibacter bethesdensis allophanate hydrolase co-crystallized with malonate
Biology and Chemistry Report
4GYS
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text Amidase signature family enzyme, HYDROLASE

    Polymeric Molecules

    Chain A,B
    Description Allophanate hydrolase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 66537.8 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    MLI  MALONATE ION  C3 H2 O4   102.05  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B Q0BRB0_GRABC Q0BRB0     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  3.5.1.54      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    4039   Allophanate Hydrolase Activity  Catalysis of the Reaction: H(2)o + 3 H(+) + Urea 1 Carboxylate = 2 Co(2) + 2 Nh(4)(+). 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 
    16884   Carbon Nitrogen Ligase Activity with Glutamine As Amido N Donor  Catalysis of the Transfer of the Amide Nitrogen of Glutamine to a Variety of Substrates. Gatases Catalyze Two Separate Reactions At Two Active Sites Which Are Located Either On a Single Polypeptide Chain or On Different Subunits. in the Glutaminase Reaction Glutamine Is Hydrolyzed to Glutamate and Ammonia Which Is Added to an Acceptor Substrate in the Synthase Reaction. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Granulibacter bethesdensis  
    Strain ATCC BAA-1260 / CGDNIH1
    Gene gbcgdnih1_1744
    Host Scientific Name Escherichia coli  
    Host Strain Hms174(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET28a-(HIS)8-TEV